Phyllopteryx taeniolatus (common seadragon): 133466381
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Entry
133466381 CDS
T09737
Symbol
xab2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133466381 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133466381 (xab2)
03041 Spliceosome [BR:
ptao03041
]
133466381 (xab2)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133466381 (xab2)
Spliceosome [BR:
ptao03041
]
Complex B
Other components
Prp19-related factors
133466381 (xab2)
Complex C
133466381 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_2
TPR_12
TPR_8
TPR_16
TPR_15
ARM_TT21_C
ARM_TT21
NRDE-2
LTN1_E3_ligase_6th
Tcf25
TPR_1
Motif
Other DBs
NCBI-GeneID:
133466381
NCBI-ProteinID:
XP_061605988
LinkDB
All DBs
Position
16:complement(19006060..19013412)
Genome browser
AA seq
850 aa
AA seq
DB search
MVEMPSLNGKQDVIFEDDDLPYEEEIIRNPYSVKCWMRYIEFKQNAAKSVLNMIYERALK
ELPGSYKLWYNYLRERRKQVKGKCINEPVYEEINNCHERALVFMHKMPRIWIDYCQFLVL
QCKITRSRRSFDRALRALPVTQHPRIWPLYLRFVRSLPLPETAIRVYRRYLKLSPENAEN
YIEYLKSVGRLDEAAVRLGAVVNDESFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGA
IIRGGLTRFTDQLGKLWCSLADYYIRSGLFEKARDVYEEAILTVVTVRDFTQVFDSYAQF
EESMIAAKMETTSEMGQDEEEDIDLELRLTRFEELIARRPLLLNSVLLRQNPHNVHEWHK
RVKLYEGVPRQIINTYTEAVQTVDPLKATGKPHTLWVTFAKFYEENEQLDDARTIFERAT
KVNYKQVDDLATVWCEYGEMELRHENYEQALRILRKATAIPSKKAEYFDASEPVQNRVYK
SLKVWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIVINYAMFLEEHNYFEESFKAYE
RGIALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQAVDGCPAKFAKTIYLLYAKL
EEEYGLARHAMAVYERATEAVENEERHQMFNIYIKRAAEIYGVTYTRAIYQKSIEVLPDE
HSRDMCLRFADMESKLGEIDRARAIYSYCSQICDPRVTAVFWQTWKEFEIRHGNEDTIRE
MLRIKRSVQATYNTQVNFMSSQMLKATTSSTGTVSDLAPGQLGIDDMKMLEQKAQELAAE
AAQDKPKPKEKILFIRSDTSRSELAELAKQANPDEIDIDDEDEDDGQGPEEVQLEQKSVP
AAVYGGLKDD
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaatgccgtcgctaaatggaaaacaagatgttatctttgaggacgacgatctt
ccatatgaagaggaaattatcagaaatccatattcagtcaagtgctggatgcgttacatc
gagtttaaacagaatgcggccaaatccgtcctcaatatgatctatgaaagggctctgaaa
gagctacctggaagttataaactatggtacaattacctgagggagaggaggaaacaagtc
aaagggaaatgtataaatgaaccagtttatgaagaaatcaacaactgccatgaaagagca
ctagtgtttatgcacaagatgccaaggatatggatcgattattgccagttcctggtgttg
cagtgtaagatcacaaggagtcggcgatcatttgaccgtgcactccgagcgcttcctgtt
actcagcatccacgcatctggcctctctatcttcgcttcgtccgaagcctgcctctgcca
gagactgctatacgagtctaccgcagataccttaagctttctccagagaatgcagagaat
tacattgagtacttaaaatctgttgggcgcctggatgaagctgctgtgcgtctcggggct
gttgtcaatgatgaaagctttgtctccaaagaaggcaaatctaactatcagttgtggcac
gagttatgcgacctgatttcacagaaccccgacaaggtgacttctctaaatgttggcgcc
atcatccggggtgggctcactcgctttacagaccagctcggcaagctttggtgctcctta
gctgattattacatcaggagcggcctctttgagaaggcccgtgatgtgtatgaggaggcc
attcttactgtggtaactgtcagggatttcacccaagtctttgacagttacgctcagttt
gaggagagcatgatcgcagccaagatggagacaacctccgagatgggccaggacgaagag
gaggacatcgacctagagcttcgactcacccgctttgaggagctgatagcacggcgccct
cttcttctgaacagtgtactgttgcgccagaacccccacaatgtccatgagtggcacaaa
cgtgtaaaactgtacgagggcgttccacgacagatcatcaacacatacacagaggcagtg
cagaccgttgatcccctgaaagccactgggaagcctcacacgctttgggtcacatttgca
aaattctatgaggaaaatgaacagctggatgatgccaggaccatctttgagagggccacc
aaagtgaactacaagcaggtggacgacctggccacagtgtggtgcgaatatggagagatg
gaactccggcacgagaactacgagcaggcactgaggatacttaggaaagccacagccatc
ccatccaagaaggctgagtactttgatgcctctgagccggtccaaaacagagtctacaag
tctttgaaggtctggtccatgttggcagacttggaagagagtcttggcacgttccagtct
acaaaagcagtgtatgaccgcattattgacctgcgcattgccacgccgcagatcgtcatc
aactatgccatgttccttgaagagcacaactactttgaggagagctttaaagcgtatgag
cgtggcatcgccctcttcaagtggccaaacgtttatgacatctggaacacttacctcacc
aagttcattgaccgatacggaggcaagaagctggagcgagccagagatctattcgagcaa
gccgtcgatggctgccctgccaaatttgcgaagaccatctacctgctgtatgccaagctg
gaggaggagtacggactggcacgccacgccatggcggtttatgaaagagcaaccgaggcg
gtggaaaatgaggagagacaccagatgttcaatatctacatcaagagagcggctgaaata
tatggcgtcacttacaccagggccatttaccagaagtctattgaggtactccctgatgag
cattccagggacatgtgcttgcgattcgccgacatggagagcaaactgggcgaaatcgat
cgggccagagccatctattcctactgctcccagatctgcgaccccagggtcacagctgtt
ttctggcagacgtggaaggaatttgagatacgtcacggaaacgaggacaccattcgagag
atgctgcgaatcaagcgcagcgtccaggctacttacaatacgcaggtcaacttcatgtcc
tctcagatgctgaaggccacaacaagctctactggcactgtgtcagatcttgctccaggc
cagttgggaattgacgacatgaagatgttggagcagaaagcgcaggagcttgcagcagag
gcagcacaggataaacccaagccaaaagaaaagattctttttattaggagtgacacttct
cgcagcgagttggccgagctcgccaaacaagccaatccagatgagatagatatcgatgat
gaggatgaggacgatgggcaaggcccggaggaggtgcagctggaacagaagagcgtccct
gctgctgtctacggtggcctgaaagatgattga
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