Phyllopteryx taeniolatus (common seadragon): 133466750
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Entry
133466750 CDS
T09737
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like isoform X1
KO
K07466
replication factor A1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03030
DNA replication
ptao03420
Nucleotide excision repair
ptao03430
Mismatch repair
ptao03440
Homologous recombination
ptao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133466750
03420 Nucleotide excision repair
133466750
03430 Mismatch repair
133466750
03440 Homologous recombination
133466750
03460 Fanconi anemia pathway
133466750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptao03000
]
133466750
03032 DNA replication proteins [BR:
ptao03032
]
133466750
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133466750
Transcription factors [BR:
ptao03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133466750
DNA replication proteins [BR:
ptao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
133466750
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
133466750
MMR (mismatch excision repair)
133466750
DSBR (double strand breaks repair)
HR (homologous recombination)
133466750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
CDC24_OB3
DUF223
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
133466750
NCBI-ProteinID:
XP_061606707
LinkDB
All DBs
Position
17:complement(20662874..20679513)
Genome browser
AA seq
740 aa
AA seq
DB search
MLCKHFTSSCLETQALFNECPVINPVLQVMYIREYPPGKQVHTRYRLNLSDGVRSLSCFL
LASRLNHLKEAELLVPNCVCMLKKISPLPLFHKRLLVVVDMDVLQTAVDAGGKIGNPTQL
IGQTTGQQEANPSTSSSDEIPGPSGYGTSGSCENSQMKSSPMMSSWKASPMKASGMMSSM
KASGMMSSMKASGMPSSMKASGMPSSMKASGMPSSMKASGMPSPMKASGMPSPMKASGMP
SPMKASGMPSPMKASPVKGSGMPSPMKASPVKGSGMPSPMKASPVKGSGMSCPMQASTSS
SPSQRQTKLTPIYELHPYLSNWTVRARVTNKSDIRNWSNSRGEGKVFSFEVLDESGEIRI
TAFNSEVDKFFSLVEQNKVYLISKGSLKVANKQYTSLKNDYEITLGANSCIVPCEDSQGV
PTVHCDFVPISQLEGKDLEAIIDVIGVCEEAEDVSLITTKAGKQLTKRALVLSDSSGKMV
TLTLWGDQAQMFNASCHPVVAVKGARLSTFGGRSLAAFFSSTVMVNPDIPEAFELRAWYN
QVGHGLCSQSLTESQFTSGEFRTNWKSLSDVKTEQLGHGEKADYFSCVATVVFARKENCL
YRACPSESCNKKVQEQDDGRYHCDKCGKDYPDFKYRFMLSVNLADFGDNVWATCFQDTAE
TLLGLGADRLGRLKDTDEDAFNEVFQKVHFSKHIFRSRVKLETYNDECRVKVTVMEVLPV
DHRQHSRRLLNSIRALACGN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcaagcacttcacgtcatcctgcctggaaacacaagccctgtttaacgagtgt
ccggtcataaatccagttctgcaggttatgtacatccgtgagtacccacccgggaaacaa
gtacacaccaggtaccgcctgaacctgagcgacggcgtgcgcagtttgtcctgcttcctg
ctggcgtcacggttgaaccacctgaaggaagcggagctgctggtgcctaactgcgtgtgc
atgctcaagaagatcagccccttgcctttgttccacaagcggcttctggtggtggtggac
atggacgtgttgcagactgctgtggatgccggaggaaagatcgggaatcccacacagtta
atcggtcaaaccaccggccagcaggaggcaaacccgagcacctccagttccgatgaaata
ccaggaccctctggatacggcacaagcggcagttgtgaaaactcccagatgaagagttct
ccaatgatgagctcttggaaagcttctcccatgaaggcatctgggatgatgtcctccatg
aaggcatctgggatgatgtcctccatgaaggcatctgggatgccgtcctccatgaaggca
tctgggatgccgtcctccatgaaggcatctgggatgccgtcctccatgaaggcatctggg
atgccgtcccccatgaaggcatctgggatgccgtcccccatgaaggcatctgggatgccg
tcccccatgaaggcatctgggatgccgtcccccatgaaggcatcgcctgtgaagggttct
gggatgccgtcccccatgaaggcatcgcctgtgaagggttctgggatgccgtcccccatg
aaggcatcgcctgtgaagggttctgggatgtcgtgccccatgcaggcgtcgacctcttcc
agtccttcccagaggcaaaccaaattgaccccaatatacgagctccacccgtacttgagc
aattggaccgtcagagcccgagtgaccaacaagtctgatatccgcaattggagcaactcg
agaggggaggggaaggtcttcagctttgaggtcctggacgagagtggagaaatcaggatc
acggccttcaacagtgaagtggacaagtttttctccctagtggagcaaaacaaggtctat
ctgatctccaaaggctcgctgaaggtggccaacaagcagtacacgtcgctgaagaacgac
tacgagatcacgctgggcgccaactcgtgcatcgtgccgtgcgaggacagccagggcgtg
cccaccgtgcactgcgactttgtgcccatctcgcagctggagggcaaagacctcgaagcc
atcattgacgtgattggtgtgtgcgaggaggccgaggacgtgtccctgatcaccaccaag
gccggcaagcagctcaccaagagggcgctcgtgctgtccgactctagcgggaagatggtg
acgctcacattgtggggagaccaggctcagatgtttaacgcctcctgtcacccggtggtg
gccgtcaaaggggctcgcctgtcgaccttcggcggccgctcgctggctgcgttcttcagc
tccacggtgatggtcaaccccgacatccccgaggcctttgagctgagagcctggtacaac
caggtaggccacggcctatgcagtcagtccttgactgagagccagttcacaagcggcgaa
ttcaggaccaactggaagtctctgagcgacgtcaagacggaacaactgggacatggcgag
aaggcggactacttcagctgcgtggcgacggtggtgttcgcccgcaaggagaactgcctt
taccgggcgtgccccagcgagtcctgcaacaagaaggttcaggagcaggacgacggacgc
taccactgcgacaaatgtggcaaggactaccccgactttaagtaccgtttcatgctctct
gtgaacttggccgacttcggggacaacgtgtgggccacgtgcttccaggatacggcggag
accttgctaggtctcggtgctgaccgactcggacgtctgaaggacacagatgaggacgcg
ttcaatgaggttttccaaaaagtccacttcagcaagcacatcttcaggagtagagtcaag
ctggagacatacaacgatgagtgtcgcgtgaaggtgactgtgatggaagtcctcccggtg
gaccaccggcagcacagcaggaggctgctgaacagcatccgcgcgttggcctgcggtaac
tga
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