Phyllopteryx taeniolatus (common seadragon): 133467215
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Entry
133467215 CDS
T09737
Symbol
lig3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133467215 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133467215 (lig3)
Enzymes [BR:
ptao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
133467215 (lig3)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
133467215 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
133467215
NCBI-ProteinID:
XP_061607808
LinkDB
All DBs
Position
17:complement(19741491..19752603)
Genome browser
AA seq
1020 aa
AA seq
DB search
MQRCVILLIKKTVDLRPLAPQLLRACASFSRLSPPPPESRHRLLSPADHHGGLPFRRLST
HPPDAMAEQRFLVEYAKRGTAGCKKCKDKIAKGIVRIGKVVPNPFSESAGEMKEWHHVKC
IFEKLERARATTKKIEDITDLEGWEELQDEDKELINRHVSDLMAKVNSSPKKKVQAKLNT
SGKLMSPPADASLNAPRKFSGFTAAKAGASSSSPLPAKANQGSALASQLCDPHHKDCLFR
EFRKLCATVAENNSYNSKTQIIEKFLRKGTGGDKFHGDLYLTVKLLLPGVVKSVYNLNDK
QIVKLFSRVFRCNQDDMVQDLEKGDVSETVRMFFEESKASPPSAKSLLTIQEVDASLTRL
AQLTKEDEQQAELEEIAKKCTSNDLKGIIRLIKHDLKMNAGAKHVLDAVDPNAYDAFKAS
RNLGDVIERVLRNQQEASNGSGPRKLLTVEATLMTPVQPMLAEACKSIEYAMKKCPNGMY
SEIKYDGERVQVHKSGDNFSYFSRSLKPVLPHKVAHFKDYIPQAFPGGHSMILDAEVLLI
DTNTSKPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNGNSLMERPLCERRKFLHDNMVEV
PNRILFSEMKHVTRAGDLADMITRVIREGLEGLVLKDVKGSYEPGKRHWLKVKKDYLNEG
AMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPDSKKWCTVTKCSGGYDDAMLARLQKE
LDVVKISKEPSKIPGWLKIVKNYYPDFLIRSPEQAPVWEITGAEFSKSEMHTADGISIRF
PRMTRIRDDKDWKSATNLHQLKELYRISKENCDFKVTAGPSGEDKASSGGDSGGNSPAPA
VSSRESAPPKKTGNRTQAKRKVVKSEPSSPALKAPAPKKVPSHVCLRFTKTHNDNFDFKK
NSQVRKSENGEQSNGHARKAKVATPPPPQMLESKNNKQTLLDIFSGVKLFLPSGVDDFAK
LRRYFVAYDGDLVADYDAASATHTVADKAEEEEGGGGRAQRVSANWIWECIRKRRVVAPC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtgtgtcattttgctaatcaagaagaccgtggaccttcgccccctcgcccct
cagctcctccgagcgtgtgcgtccttttcacgcctctcacctccgcctcctgaatcccgc
caccgtctcctctcgccagccgaccatcacggaggcctcccgttccgccgcctctccacg
cacccgcccgacgccatggcggagcaacgcttcctggtggagtacgccaagcgcggcacg
gctggctgcaagaagtgcaaggacaagatcgccaaggggatcgtgcgcatcggcaaggtg
gtgcccaacccgttcagcgaatcggccggcgagatgaaggagtggcaccacgttaagtgc
atctttgagaaactggagcgcgcccgtgctactaccaagaagatcgaggacatcactgac
ctggagggctgggaggagctgcaggacgaggacaaggagctcatcaatcgacatgtctca
gacctgatggccaaagtgaactcgagtcccaagaagaaggtgcaggccaagttgaatacg
tcgggcaagctgatgtctcctcccgccgacgcgtcgctgaacgcaccgcgcaagttctca
ggcttcactgccgccaaggcgggcgcctcctcgtcttcgcccttgcccgccaaagccaac
cagggcagtgctctggccagccaactatgcgacccgcaccacaaggactgcctgtttcgg
gagttccgcaaattgtgcgccacggtggccgagaacaacagctacaacagcaagacgcag
atcattgagaagttcctgcgcaagggcaccggcggagataaattccacggcgacttgtac
ctgacggtgaagctgttgctgcccggcgtggtgaagagcgtgtacaacctcaacgacaag
cagatcgtcaaactcttcagccgcgtcttccgatgcaaccaggacgacatggtgcaagat
ctggagaagggcgacgtgtcagagacggttcgcatgttcttcgaggagagcaaagcctcc
cccccgtctgccaagagcctgctgaccatccaggaggtggacgcgtcgctcacccgcctc
gcgcagctcaccaaagaggacgagcagcaggccgagctggaggaaatcgccaaaaagtgc
accagcaacgacctgaaaggcatcatccggctcatcaagcacgacctgaagatgaacgcc
ggagccaagcacgtactggacgccgtggatccaaacgcttacgacgccttcaaggcctcc
cgaaacttgggcgatgtaatcgagcgcgtgctgaggaaccagcaggaggcgtccaacggc
tcgggcccgaggaagctgctcacagtggaggccacgctcatgacacccgttcagcccatg
ctggcggaggcgtgcaaatccattgagtacgccatgaagaagtgccccaacggcatgtac
tcggagataaagtacgatggcgagcgcgtgcaggtgcacaagagtggcgacaacttcagc
tacttcagccgcagcctcaaacccgtgttgcctcacaaagtggcccacttcaaggactac
atcccgcaggcgttccccggtggtcacagtatgattttggatgccgaggtgctactcatc
gacaccaacaccagcaagccactccccttcgggacgctgggcgtgcacaagaaagccgcc
tttcaagacgccaacgtgtgcctctttgtctttgactgcatatacttcaatggcaacagt
ctcatggagaggccgctgtgcgagcggcggaagttcttgcacgacaacatggtggaggtg
cccaaccggatcctgttttccgagatgaagcacgtcacgcgtgcgggagacctggccgac
atgatcactcgagtcatcagggaaggtttggaaggcctcgtgctcaaagacgtgaagggc
tcgtacgaaccaggcaagcgtcactggctgaaggtgaagaaggactacctgaacgagggt
gccatggccgacacggccgacctggtggtgctgggcgccttctacgggaaaggctccaac
ggcggcatcatgtccagcttcctgatgggctgctacgacccggactccaagaagtggtgc
actgtcaccaagtgctcgggaggctacgatgatgccatgttggctcgactccagaaggaa
ctggatgtcgtcaagatcagcaaggagcccagcaaaatccctggctggctgaaaatcgtc
aagaactactacccggatttcctcatccgcagtcctgagcaagcgcccgtgtgggagatc
acgggcgcagagttctccaagtcggagatgcacacggccgacggcatctccatccgcttc
ccgcgcatgacgcgcatccgcgacgacaaggactggaagagcgccaccaacctgcaccag
cttaaagagctgtatcgcatctccaaggagaattgcgacttcaaagtgacggcaggaccg
tccggcgaagacaaggcctcgtcgggaggggacagcggcggaaactcgcccgctccggcc
gtgtcatcgcgtgaaagcgccccacccaaaaagacagggaaccgtacccaagccaaacgc
aaggtggtcaaatctgagccgagctcccccgctctcaaagctcccgcccccaagaaggta
ccatctcatgtttgtttgcgctttacaaaaacacacaatgacaattttgactttaaaaaa
aactcccaggtgaggaagagtgaaaatggagagcagagcaatggacacgccaggaaggca
aaggtggccactcctcctcccccgcaaatgctggagtccaaaaacaacaagcagacgctg
ctggacatcttcagcggcgtcaagctcttcctaccgtctggcgtggacgactttgctaag
ctgcggcgctacttcgtggcgtacgacggcgacctcgtggccgactacgacgccgcctcg
gccacccacacggtggctgacaaagcggaggaggaagagggcggcggcggccgggcccag
cgggtgtcggccaactggatctgggagtgcatccgcaagaggcgggtagtggctccctgc
tga
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