Phyllopteryx taeniolatus (common seadragon): 133470425
Help
Entry
133470425 CDS
T09737
Name
(RefSeq) transcription factor Sox-17-alpha-A-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133470425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptao03000
]
133470425
Transcription factors [BR:
ptao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
133470425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
133470425
NCBI-ProteinID:
XP_061614796
LinkDB
All DBs
Position
20:3759860..3764265
Genome browser
AA seq
370 aa
AA seq
DB search
MSSPDAGYASDDQNQARCAMSVMMPGMGHCQWADPLSPLGEPKAKGEASAGLGAAAAAVA
GGAAGGNHQSRGKSEPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLP
LVDKQPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRIKRLDSGFLLHGGSAEHRAPGDG
GLGYHEHTGFPQIPQQQQQPLGHYRSDPLGGPSYESYSLPTPDTSPLDAVDADSMFFPTQ
EDSHMMYAYHPQGPEYQQQEPLHHHATHHQGSYMGHPNPLAVYYGHPKRHPGAGQLSPPP
DCHPHAVADNAELLSEVDRNEFEQYLSSSASNSLAYGAPHEGGAQGHDGLISSVLSDAST
AVYYCSYNNS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggctacgccagcgacgatcagaaccaggcaaggtgcgcgatg
tcagtcatgatgcctgggatgggacactgccagtgggccgaccccctcagcccactcggg
gagcccaaggcgaagggcgaggcgtccgccgggctcggcgcggctgcggcggcggtcgct
ggaggtgcggccggagggaaccaccagagtcgcggcaagagcgagccgaggatccggcga
cccatgaacgccttcatggtgtgggcgaaagacgagcgcaagcggctggcgcagcagaac
ccggacctgcacaacgccgaactcagcaaaatgttgggcaagtcgtggaagtccctccca
ctggtggacaagcagccgttcgtggaggaggcggagcgtttgcgggttcagcacatgcag
gaccaccccaactacaagtaccggccccgcaggcgcaagcaggtgaagcggattaagcgg
ctggactccggcttcctgctgcacggggggtccgccgagcaccgggcccccggggacggg
gggctgggctaccacgagcacaccggcttccctcagatccctcagcagcagcagcagccc
ctcggtcactaccgatcggaccccctcgggggcccctcgtacgagagctacagcctcccc
acgcccgacacctcgcccctggatgcggtggacgccgactccatgttcttccccacccag
gaggactcccacatgatgtacgcctaccacccgcagggccccgaataccagcaacaggag
cccctccaccaccacgccacccaccaccaaggctcctacatggggcaccccaaccctttg
gccgtgtactacggtcacccgaagcggcacccgggggcgggtcagctgtctccgccgccc
gactgccacccgcacgcagtcgccgacaacgcggagctgctgtccgaggtggaccgcaac
gagttcgagcagtacctgagctcctcggcgtcgaactcgttggcgtacggggccccgcac
gagggcggcgcgcagggacacgatggcctcatatcgtcggtgttgtcggacgccagcacc
gctgtgtactactgcagctacaacaactcgtaa
DBGET
integrated database retrieval system
