Phyllopteryx taeniolatus (common seadragon): 133470559
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Entry
133470559 CDS
T09737
Symbol
topbp1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133470559 (topbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptao03032
]
133470559 (topbp1)
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133470559 (topbp1)
DNA replication proteins [BR:
ptao03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
133470559 (topbp1)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
133470559 (topbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
YscK
Motif
Other DBs
NCBI-GeneID:
133470559
NCBI-ProteinID:
XP_061615027
LinkDB
All DBs
Position
20:complement(2984129..2998296)
Genome browser
AA seq
1520 aa
AA seq
DB search
MRLDIMSKGDKEGFIVKFVGSKGQTSEYAAKAYEAIMELQSEKYLKKIDEEAVLKMDQKD
KSLFVFSDFDTPAFQHCKNLGCRIVSPLVVVFCLQQQRCVPKAEKPVYNMAMDDITVSCT
SLDKTTRAEVMNLVQLMGGRVYLDLNVSVTHLIAGEVGSKKYLVAASLGKPILLPSWVKD
CWESSQNSLFRYTELPLEDHLCPVLRGCTVCVTGLSSTERKEVQRLCEQHGGRYTGQLKI
NECTHLIVNETSGQKYECARKWNVYCVALHWLFDSIEKGSCQDESRYAVERRASKSSQPN
TSTPTGSGQKEEGPSLLGLSHISVNTSVTINDTALTNGTVSRVEAPDPIESLDLTVCPAE
DVLDGCKLYLCGLPVKKLDKLRRLVNAAGGLRFNQPSEELTHVVMGEPDQDLKTFLSRAT
HRPHVVTVQWLLDSFSKGRLLPEEDFLHLDCLPPAPAEVLSAPVRRTPASRSLVGPPAAS
PSTPKLKQAEEDLLSQYMDDDTTVIDVAPAAEIDSRRSISVPAEQSWTLNHGARPQSDYT
VQEASEAGLFAGKRFLLQGFGAEAEAQLSLLVRENGGRVLASRTRAVADYAVVPLLGCSV
EATVDEVVTDTWLAMCVERECLLELSSNPLFTPVPVMDGHFPLKDCILSFSQFTGAERES
LVELAKHLGANVQDYFVRLANPKKGMLASTHLVLQSPDGTKYQAAKKWGLPAVTMHWIMA
SARTGQRVAEKRFLIDLPPSPEREEESFVGASQRTSMPAPAQPARSFPDIPLLGFQSGKA
VTPLDLGRFQSKMFRSVLDEMKSKKDVATPKQSQEDGRRKQLCKEPSLQLDTPSRFLSRD
QLFRPSFNVKDALEALDTPGGRSKPNESAETPLTDLINRNMKVALANSARASDVANMQAV
SASPELSTTRKEAVQKEAGLLSGIVICVGKKLSKMQSELYAMAASLGADFRWACDDTVTH
YIYQGRVGDNSREYRGVKERGLHVVSQHWLEACAEEQRHISESLYPFTYNPKMSLNLSQV
PSNSQRSPPVTRPQLRDITEATDDNVGPNDSELKAVEDPSTSHHTCDGSEDQDDLADKND
ISEALEMRENLQRALQEIMSATKKTTGRRQSVRLSRTASAGADSAPNTPSGSRRTLEALR
VSRAAALDLNTEPSQSEQIVWDDPTAREERAKLADNLQWPGSPSQHSEPQAPPPQTTAQH
DTQLKDSMTDSELVEMEACDVIDQQMGKKGSALPQEEPRNNILTPEAPSIAFPLAIPTVA
PEPEEESEEVKTPPRFQLSSLSPQERIDYSHLIEELGGVILDKQSFDPSCSHIIVGTPLR
NEKYLAAMAAGKWILHRSYLEACRSVGRFIPEEDYEWGSSSILDALPSITSQQRRLALAA
MRWRKTLRGPTEQGGAFSGWTVMLNIDQSREAGFRRLLQSGGAKVLPSASPSMYKVATHL
FADFNRLRPGDFRADVSEASAQNVTCLKPEYIADYLMQEPIPPTALYLLAESPPGEAPGT
PSLKRKAAERTSRLKKSRLH
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggacatcatgtccaaaggcgacaaggaaggctttattgtcaaatttgttgga
agtaaaggacagacatcagagtatgctgccaaagcttatgaggctattatggagctgcag
tcagaaaagtacctcaagaagatcgacgaggaagctgtgttaaagatggaccagaaggac
aagtccctctttgttttcagtgactttgacactcctgccttccagcactgcaagaatctg
ggctgccggatcgtaagtccgctggtggtggtgttctgcttgcagcagcagcgttgcgta
cccaaagcggagaagccggtctacaacatggccatggacgacatcaccgtctcctgcaca
agcctggataaaacgactcgggccgaggtgatgaatttggtgcagctcatgggcgggcgc
gtctatcttgacctcaacgtgtccgtcacccacctgattgctggtgaggtgggcagtaaa
aagtacctggtggctgccagcctgggcaaacccatcctgctcccttcctgggtcaaagac
tgctgggagagctctcaaaacagtctgttcaggtacacggagctgcccttggaggaccac
ctgtgcccggtgctgcggggctgcaccgtgtgcgtgacaggtctctccagcactgagcgc
aaagaagtgcagcgtctgtgcgagcagcacgggggccgctacaccggccagctcaaaatt
aacgagtgcacccacctcatcgtcaacgaaacctcaggtcagaagtatgagtgcgcgcgc
aaatggaatgtgtactgcgtggctctgcactggctcttcgacagcatcgaaaagggctcc
tgtcaggacgagtcccgctacgccgtggagcgccgggcctccaaaagcagccagccaaac
acctccacgcccaccggctctggccagaaggaagagggtccttctctgctgggtttgagc
cacatctcagtcaacaccagcgtgacaataaacgatacggccctcacgaatggaaccgtc
agccgggtggaagctccggaccccatcgaaagtctggatcttaccgtgtgccccgcagag
gacgtcctggacggctgtaagctttatctctgcggcctgcctgtgaagaagctggacaag
ctgcgtcgcctggtgaacgccgcagggggtcttcgcttcaaccagcccagcgaggagctc
acacatgtggtcatgggagaaccagaccaggacctcaagactttcctgtccagagcaact
cacagacctcacgtggtgacagtccagtggctgctggacagcttctccaaaggccgcctc
ctcccagaagaagacttcctccacctcgactgtctgcctcccgctcctgcagaggtgttg
tccgcgccggtccgtcgcacgccggcctccaggtccttggtcggaccccccgccgccagt
cccagcacaccaaaactgaagcaagcggaggaggacctactctcgcagtacatggatgat
gacacgacagttattgacgtggcgccagcagccgagatcgacagcaggaggtccatcagc
gtgcccgccgagcagtcctggaccctcaaccacggggccagaccacagtcagactacact
gtgcaggaggccagcgaggcgggtctctttgccggaaaacgattcctcttgcagggcttc
ggcgccgaggccgaggctcaactttccctcttggtgagggagaacggaggtcgggtgctg
gcgagccgcacgcgtgccgtagctgactacgccgtggtgcctctgttgggctgttctgtg
gaggccacggtggacgaggtggtcactgatacgtggctggctatgtgtgtggagagggag
tgcctcctggagctttcctccaatcctctcttcactcctgttcccgtgatggatggacat
ttccctctcaaggattgcatcctttctttcagccagttcacaggagccgagagggagtcc
ttggtggagctggccaagcacctgggagccaatgtccaggactactttgtgcgcttggcc
aaccccaaaaaaggaatgctggccagcactcacctggtgctgcagagccctgatggcacc
aagtaccaggcagccaagaagtggggtctcccggcagtcaccatgcactggatcatggcg
tcggcgaggaccggccagagggtggccgagaagcgcttcctgattgaccttccaccttct
cctgagagggaggaggagagttttgtcggcgcctcccagaggacgtccatgccggcaccg
gcccaaccggcgcgctcctttccggacatcccgctgctgggttttcagagcggcaaggcg
gtcacgccgctggatttgggacgctttcagagcaaaatgttccgctccgtgttggacgag
atgaagtcaaaaaaagacgtggccacgcccaagcaaagccaggaggacggccgcaggaag
caactctgcaaggagccctcgctgcagctggacacgccgtcccggttcctcagcagggat
cagctgttcaggccctcattcaatgttaaggatgccttagaggcacttgacactccaggt
gggagatccaagcccaacgagagtgcggagacgccgctgacggacctcatcaacaggaac
atgaaggtggcgctggccaacagcgcccgcgccagcgatgtcgccaacatgcaagcggtt
tctgccagtcccgagctcagcaccaccaggaaggaggctgtacaaaaggaggccggcctg
ctaagtggcattgtgatctgcgtgggaaagaagcttagcaagatgcaaagcgaactgtac
gccatggccgcctcgctcggagcagacttcagatgggcctgcgacgataccgtcacccac
tacatctaccagggccgagtgggtgacaacagtcgggaataccgaggcgtgaaggagagg
gggctgcatgtggtctcgcaacactggttggaagcttgcgctgaggagcaaaggcacatc
tcggagtctctttatcctttcacctacaaccccaagatgagcctgaacctcagtcaggtt
cccagcaactcgcagaggtctccgcctgtcacgcgaccacaactacgagacatcactgag
gccacggatgacaacgtgggcccaaatgattctgagctcaaggcagtagaagacccttcc
acctctcaccacacatgcgacggaagcgaagatcaagacgaccttgcagacaagaatgat
atttcagaggcgctggagatgagagagaacctgcaaagagcgctccaagagatcatgtct
gccaccaaaaagacgaccggcaggcggcagtcggtgcgactcagtcggacggcgtccgcc
ggcgccgactctgcccccaacactcctagcggcagcaggcgcactctagaagcgttaagg
gtctcccgcgcagctgctctggatctcaacacggagccctcccagagcgagcagatcgtt
tgggacgatccgacagccagggaggagagggccaagctggccgacaacctacagtggccc
ggtagtccttcgcagcactcggagcctcaggcgccacccccgcagaccacagcgcagcac
gacacgcaactcaaggactccatgaccgactcggagctggtggagatggaggcttgtgat
gtcatcgaccagcaaatgggcaagaagggctcagcgctcccgcaggaggagccgcggaat
aacatcctgactcccgaagcccccagcatcgccttccccctcgcaatccccacggtagct
cccgagccagaggaggaaagtgaagaagtgaagacgccgcccagattccagctgtcctcc
ctcagtcctcaggaacgcatcgattacagtcacctcatcgaagagctcggtggcgtcatt
ctggacaagcagtcgtttgaccccagctgctcccacatcatcgtaggcacacccctgcgc
aacgaaaaatacctggcagccatggcggccggcaaatggattctgcatcgctcatacctg
gaggcttgccgttctgtgggccgcttcataccggaggaggactacgagtggggcagcagc
tccatcctggacgcgttgccctccatcacctcgcagcagaggcgcttagcgttagctgcc
atgcgctggaggaaaaccttgcggggacccacggaacagggcggagccttcagcggatgg
acggtgatgttgaacatcgaccagagccgagaagccggcttcaggcggttgctgcagtcg
ggcggggccaaggtgctgccgagcgcctcgccttcaatgtacaaggtggccacgcacctg
tttgccgacttcaaccgcctgcggccgggcgacttccgtgcggatgtgtccgaggcctcc
gcccaaaacgtgacttgcctgaagcccgagtacatcgccgactacctaatgcaggagccc
atccctcccacggcgctctacctcctcgccgagagcccccccggtgaggctcccggcacg
ccgtcacttaaacgcaaagcggcagagcgcacctcccggctgaaaaagtctcgactgcac
tga
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integrated database retrieval system
