Phyllopteryx taeniolatus (common seadragon): 133470689
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Entry
133470689 CDS
T09737
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133470689 (smarcc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptao03021
]
133470689 (smarcc1b)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133470689 (smarcc1b)
Transcription machinery [BR:
ptao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133470689 (smarcc1b)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133470689 (smarcc1b)
PBAF complex
133470689 (smarcc1b)
GBAF(ncBAF) complex
133470689 (smarcc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
SWIRM-assoc_3
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
133470689
NCBI-ProteinID:
XP_061615316
LinkDB
All DBs
Position
21:10796441..10805592
Genome browser
AA seq
946 aa
AA seq
DB search
MSGGTNLEFPGTSQTSSGFAAHRKKDSSPSAWFWESPDTLAQLEIVRQWIGKHYKKCVLV
DAPSCQALAAVTLQLLQFQEDAFGRRVPNPARNKLPTQCFMDLRPGAGLCHILGSAYKFK
VEQGWRRFDLQNPSRTERNVEMFDVIERTLLQHNCMSHPVVYLDPSLDQELASRISGVVT
KHQGTLSVDRDLASHHIYPFPSSTDEEEWIRPVMRKQSHILVHWGMHPDSYDTWLPSNDI
DGDVEDPPHPEKPWRVHAGYVLDTDIFNEWMNEEDYCVNEGNVSLILRQRIQLREEQDTK
STPFKKRRRSPSPLSSEARKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEEIVLPKI
VNFKKDSENTPVKGGIMADLDDQEDDFPGRDDEEGRVEIPRLLEGEDNITEQTHHIIIPS
YTSWFNNNSIHSIEKRALPEFFNGKNKSKSPEVYLAYRNFMIDTYRLNPQEYLSSTSCRR
NLTGDVCSIMRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQHKP
LQVTASQHMLCFPEKSREKPSDCQNFGLRMDVYAKKHPKTKGACAGREWTEQETLLLLEA
LEVYRDDWNKVSEHVGSRTQDDCILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQSENP
VMSTVAFLASVVDPRVASAAAKAALEEFSQVQEESLNGITCNQLKLTDSMDASQMQINTS
SHQVAVNADGLLVESIVPKVEGEIIKRENADESERIHIGTGNEDDGMQRQEGEGDEGRAV
MELDLVESTVTTAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEE
LETIMDREKEALEQQRQQLLAERQTFHTEQLKQAEMKLQQQREQQSQPGFPTQHSGQSMT
NQIAPSGGQMQAMAPRHTGAPNGMYPSSQPEGMTAAQPGLPASSHS
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggaacgaaccttgagtttccagggacaagtcagaccagctccgggttcgcc
gcgcatcgcaaaaaagacagcagtccgtcagcctggttctgggagagtcctgacacttta
gctcagctggagatagtgcgccagtggatcgggaagcactacaaaaagtgtgtgttggtg
gatgctccatcatgtcaggcactggctgctgtgacgctgcaactcctccagtttcaagag
gatgcttttggcagacgagttccaaatcctgcccgcaacaaactacccacgcagtgtttc
atggacctgcggccaggggctggactctgtcacattctcggttctgcttacaagttcaaa
gttgagcaaggctggcgaagatttgacttgcaaaatccatcaaggactgaaaggaatgtt
gaaatgtttgatgtgattgaaagaacattattacagcacaactgtatgtcacatccggtg
gtttatctggacccttcactggaccaggagctggctagcagaattagtggtgtcgttaca
aagcaccagggtacacttagtgtggacagagacctggccagtcaccacatatatccattc
ccctcatccacagacgaagaggaatggattcggcctgtcatgcgaaaacaaagccatatc
ctggtacattggggcatgcaccctgacagttatgacacctggttgccctcaaatgatatc
gatggagatgttgaggacccccctcatccagagaaaccgtggagggtccacgctggctat
gttctggacacagatattttcaatgagtggatgaacgaggaagactattgtgtgaatgaa
gggaacgtgtctcttattcttcgacagcgcatacaactacgagaagaacaggacaccaag
tccactcccttcaaaaagagaagacgctctccatctcccctgtcctctgaagctaggaag
aaaggaaagaaggggaggcgacgtggacagcaggaggaagagccagaggaggacttgacc
aaagatatggaggaccccactcctgttcctaacatggaggagattgtattacccaagatt
gtcaacttcaaaaaagacagtgagaatacgcctgtcaaaggaggtatcatggctgacctg
gatgaccaggaagacgattttccgggaagggatgatgaggagggaagagtggagattcct
cgcctattagagggagaggacaacatcactgaacaaacccatcacatcataataccaagt
tacacatcttggttcaataacaacagcatccactcaatcgagaaacgcgccctccctgaa
ttcttcaatggaaagaacaagtcaaaatcacccgaagtctacctggcctaccgtaatttc
atgattgacacataccggctcaacccccaagaatacctcagttcaacatcctgcaggcgg
aatcttactggagatgtttgttccatcatgagggtgcatgcgtttttggagcagtggggt
ttgattaactaccaggtggatgcagagagcagaccgctccccatgggacccccacccact
cctcatttcaacgttttagcagacacacccagtgggctggcccccttacaacacaaacca
ctgcaggtgacagcatcacagcacatgttgtgcttccctgaaaagagccgagagaagcct
tcagattgccagaatttcggcttgcgcatggatgtttacgccaagaaacacccaaagaca
aagggagcttgtgcaggacgggaatggacagagcaagagacgcttttgttattagaggcc
ttggaggtctatagagatgactggaataaagtatctgagcatgtgggctccagaacgcag
gatgactgcatcctccacttcctccgtctacccatagaagatccgtatctcgaggattcg
tccgcctccctcggcccgctggcataccagcctgtgcccttcagccaatccgaaaaccct
gtgatgagcactgtggccttcctggcctcggtggtggatccacgggttgcgtcagctgcc
gctaaggctgcgctggaggaattttcacaagtccaggaagagtctttaaatggaataacc
tgcaaccagttgaaactaaccgactcaatggatgcttcacaaatgcagataaacaccagt
tcccatcaggttgctgtcaatgctgatgggctcctggttgaatcaatagtgccaaaagtg
gaaggagaaatcatcaaaagagagaatgcagatgaaagcgaaaggattcatatcggcaca
ggtaatgaggacgatggcatgcagcgtcaggagggagaaggggatgaggggagagcagtg
atggagctagatcttgtagagagcactgttaccacggcagcagcagctgctttggcctct
gctgcgacaaaagccaagcatttggcagcagtggaggagagaaagatcaagtctctggtt
gctttgctggtggagactcaaatgaagaagcttgagatcaaattgaggcactttgaagag
ctggagaccatcatggaccgtgagaaagaggctttggagcagcagcggcagcagcttctt
gcagagaggcagaccttccatacggagcagctcaaacaggcagagatgaagcttcagcag
cagagggagcagcagagccagccaggcttcccaacgcagcattcgggtcagtccatgacc
aaccagatcgctcccagcggaggacaaatgcaggcgatggccccccgccacaccggagca
cccaatggcatgtatccgtcctcgcagcccgaaggcatgacggcagctcagcccggtctt
ccggcgtctagtcacagctga
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