Phyllopteryx taeniolatus (common seadragon): 133472785
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Entry
133472785 CDS
T09737
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao04382
Cornified envelope formation
ptao04510
Focal adhesion
ptao04512
ECM-receptor interaction
ptao04518
Integrin signaling
ptao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133472785 (col4a6)
04518 Integrin signaling
133472785 (col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133472785 (col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133472785 (col4a6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133472785 (col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptao04147
]
133472785 (col4a6)
00536 Glycosaminoglycan binding proteins [BR:
ptao00536
]
133472785 (col4a6)
Exosome [BR:
ptao04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133472785 (col4a6)
Glycosaminoglycan binding proteins [BR:
ptao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133472785 (col4a6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133472785
NCBI-ProteinID:
XP_061620112
LinkDB
All DBs
Position
23:complement(3647157..3692629)
Genome browser
AA seq
1710 aa
AA seq
DB search
MKLLFCVAAVVVAVRSTHAGDNSNEPCSGLDCSGGCRCNPEKGARGHPGPLGEVGQSGAE
GPRGSPGPVAPKGEKGHIGLKGPSGPKGDKGPMGVPGFQGNDGVPGHTGQQGGRGPPGLD
GCNGTRGEPGYPGYGTGGPGQPGFAGPIGPKGQKGEPRYITDGGVTRLPGLPGEDGRPGT
SGPDGPVGFAGPPGPEGYPGPPGPPGSPGPMGSRSDGYQGEKGDKGDLGLPGPSGTPGDG
SLRSEQTLTIYKGDKGEPGPKGIRGFPGNSGPPNPFGFRGEFGEKGIPGYPGARGPPGFN
GPPGLPGQQGYRGTSGFPGQPGYSGPKGDQGEPGLPGPPAFVSGPGTSVQGPPGEPGFNG
LPGAPGDQGPPGFPGPPGPPGLGGFGSDRPASSGFPGTPGPKGEKGSPGVPGYGTEGLPG
SPGLPGIPGPPGPQGLSSRPVEPCVIYHEGEKPTVSPGASVPGVPGLPGPRGPSGERGYK
GFRGDPGDCNCIGGGSSGLPGAPGSPGANGSPGFTGPKGESGDVGSPGFGGLQGPPGRGG
ERGFLGRKGEKGVSYYTTFGFGVKGELGATGPRGPTGETGTPGRDGSPGFPGPPGPPGDA
GIGTRGDRGFPGFPGSKGRPGGPGEPGAGFAGTPGFRGEPGEPGFSGLPGPPGLPGPRGE
NSCGEVIDSEEGTGQVLPCTIPGEVGLPGFPGGPGRPGPKGQPGLPGGPGRPGFDGAKGE
RGEPGFGGQPGPQGFPGPRGDGGVPGSPGQSFDGSRGKDGVPGRPGAKGQPGEVLGATAG
PPGRDGFPGAPGDKGQPGTPGGAGPPGLNGRSGVPGRQGERGVDGFPGLPGSPGLPGDPT
VEVPGPPGIDGSNGPRGSPGFPGRKGDRGDPGFPGPAGMKGTPGLPGTPGSPGSRGAPGP
PGPGTRMGLPGIPGRKGERGFPGVTGFPGQPGRPGNPGFPGGKGVPGGPGRDGLSGGPGY
TGQKGEPGLPGPAGPPGPLVSVVSAGRGDPGTPGGSGLPGFTGPRGDKGLPGPPGRQGLP
GLPGFAEQSKGQPGQPGFPGQPGFPGGPGPKGEAGILGFPGMSGPRGDDGLPGIPGNPGQ
PGRPGTKGQPGESFGFPGAPGFKGQPGDSGFPGGRGNNGAPGDDGFPGSPGFPGVKGGPG
EAGLPGIMGSPGYPGPKGQSGFPGPRAPDGTPGSPGRPGGPGPKGLPGSPGLDGLNGLRG
PKGLPGTPGASGRARQGTPGIPGLKGERGVSYPGTPGFPGQKGERGESGGPGLTGFPGRP
GLPGRSVGSDIPGPLGDPGLPGLDGEFGLTGPPGPPGPPGPGTDQGERGDPGLPGYPGTP
GRKGEPGIPGGPGISGSPGFKGLQGDTGFSGGPGLKGFSGDPGYYGSKGAKGFRGPAGPK
GRPGITLPGTFQQFERPFGDGGPPGGPGPRGFTGVTGQPGMPGQPGSKGRPGSVGKLGRT
GSVGLPGPVGDPGPPGFPGPTGEQGLPGTVGRPGGPGSVGRSISIGYTLVKHSQNVQVPM
CPQGMAKLWDGYSLLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNEVCYYASRNDK
SYWLSTTAPIPMMPVAQIQIRPYISRCSVCEAPSQAVAVHSQDLTIPNCPPGWRSLWIGY
SFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAKGTCHYFGNKYSFWLTTVDPNR
EFVYSPAQETLKGGQERSKVSRCQVCSKVL
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcctgttttgcgtggcggcagtcgtcgtggcggtgagatcgacccacgcaggg
gacaattctaacgagccgtgttccggtttggactgcagcggaggatgcaggtgcaacccg
gaaaagggagccaggggtcatccggggcctctcggtgaggtcgggcagagtggagcagag
gggccccgcggcagccccgggcccgtagcgcccaaaggagaaaagggccacattggcttg
aaaggaccatccggccccaaaggagacaaaggaccaatgggagtgcctggatttcaagga
aacgatggcgtccctggtcacaccggtcagcagggtggcagaggaccaccgggactggac
ggctgtaacgggaccagaggggagcccgggtatcctggctacggcaccggcggccccggg
caacctggttttgcaggacccatcgggcctaagggtcagaaaggagaacctcgatacatc
actgatggcggcgtcacccgtttacctggccttccaggagaagacggtcgccccggcacc
agtggtcccgatggtccagttgggtttgctggtccacccgggccggaaggatatcccggc
ccacccggtcctcccggttcaccagggccgatggggagtcgtagtgatggatatcaaggc
gagaagggagacaagggcgacttgggtcttccgggaccgagtggtactccaggtgacgga
tctctacgaagtgaacaaaccctcacgatctacaaaggagataagggtgaacctggaccg
aaggggattcgtggattccctggaaacagtgggcctcctaacccttttggtttccgcggg
gaatttggagagaaaggaatacccggatacccaggggcgagaggtcctccgggttttaac
ggacctcccggcctgcctggacaacagggatacagagggacttcaggattccccgggcaa
ccaggatacagcggacccaagggagaccagggagaacccggactcccaggacctcccgct
tttgtcagcggtccaggcacttctgttcaaggaccgccaggtgaaccaggctttaacggg
cttccaggtgcacccggtgaccaaggacctcccgggtttccaggcccaccaggtcctccg
ggacttgggggattcggttccgatcgtcccgccagctcgggtttcccagggaccccgggc
ccgaagggggagaaaggtagccccggcgtacctggctacggcacagaaggactcccaggc
tcccctggacttccagggattccagggcctcctggaccgcagggcctctccagccgaccc
gttgagccctgcgtcatctatcacgagggggaaaagcccactgtttcacccggcgctagc
gttccgggggtcccggggctgcccggtccccggggaccgtcgggagagcgaggatataaa
ggtttcagaggggatcccggtgactgcaactgtatcggcggcggctcctcggggctgccc
ggggcacccggatctcccggtgccaacggcagccccggcttcactgggccaaagggggag
tctggagacgtgggctcacctggcttcggaggccttcagggacctcctggccgcggcggc
gaacgtggtttccttggccgcaagggagaaaaaggggtgtcttactacaccactttcggt
ttcggagtgaagggagagctcggagctactgggcccagaggacccaccggagaaacgggt
acaccgggcagggacggatcgccgggcttccctggaccccccggtcccccaggggatgcc
ggcattggcacgcgtggagacagaggtttcccgggcttcccgggatccaaggggcggccc
ggagggcctggcgagcccggcgccggctttgccggcacgcctggtttccgaggcgagccc
ggagaacccggtttttccggactgccggggccaccaggtttgcctggaccaagaggcgaa
aacagctgtggagaggttattgacagcgaagagggaacgggccaagtgcttccctgcacc
atccccggtgaggtcggactgcccggttttcccggtggacctggacgaccaggtcccaaa
ggtcagccgggcttgccgggaggccctggacgtccaggatttgacggcgcaaaaggagag
agaggagagcccggctttggagggcagcccggaccgcaaggtttcccaggacccagaggg
gacggcggagttcccggtagcccgggacaaagttttgacgggagcagggggaaggacggt
gtcccgggacgccctggagccaaaggccagcctggagaagtcctgggtgccacagcgggg
cctccaggacgagatggttttcccggagcccctggagacaagggccagcccgggacaccg
ggaggggccggaccacccggtcttaacggacgctcgggtgttcccgggcgtcagggcgaa
cgaggagttgatggttttcctgggctccccggttctcctggactcccaggcgatccaacc
gtcgaagtccccggtccgcctggaatcgatggcagcaatggccccagaggctcaccaggt
tttcctggtcgaaaaggagacagaggagacccaggtttcccaggacctgctggtatgaag
ggcaccccaggactaccgggtacccctggctcaccggggtcaaggggagcacccgggcct
ccgggaccaggaacaaggatgggattgccgggaataccaggaaggaagggtgagcgaggt
ttcccaggggtgacgggcttccccggacaaccaggacgtcctggaaatccaggatttcct
gggggaaaaggagtgcccggggggcctggaagagatggactttctggggggcccggctac
actggacagaaaggtgagccagggttacccggtcccgccggcccgcccggtcctctggtt
tcagttgtgtctgcaggcagaggagaccccggaacccctggaggcagtggccttcctggc
ttcaccggaccaagaggtgacaaagggcttccaggcccgccgggtcgtcagggtctgcct
ggacttccaggttttgccgaacagagtaaagggcagccgggacaacctggtttcccaggg
cagccgggatttcccggcggcccaggtcctaaaggtgaagctggaatcctgggattccct
ggcatgtctggaccaaggggagacgacggcttacctggtatccctggcaatcctggacag
cctggtcgtcccggtaccaagggtcagcctggagagtcttttggctttccaggtgcacca
ggctttaaagggcagcccggagattcaggatttccaggtggtcgtggcaataatggcgct
cctggtgatgacggcttcccaggaagtcctggtttccctggagtcaagggaggacctgga
gaagctggattgcctggaataatgggttcacctggttaccccggaccaaaaggtcagtct
ggtttccccggaccaagagcgccagatggaacccctggttcgcccggacgcccaggaggt
cccggacctaaaggtcttcctggatctcctggtttggacggccttaacggcctccgtgga
cctaaaggccttcctgggacacctggggcgagtggcagagcgcgccagggtacccctggt
attccgggcttgaagggcgagagaggcgtctcctacccaggaacaccaggtttcccagga
cagaagggagagagaggagagtcaggtggtcctggactcacaggatttccaggtcgacct
ggactccccggtaggtcagttggctcagatatcccagggccattgggagatcccggcctc
cctggactggatggagagttcggtttgaccggtcctccaggccctcctgggccacccggc
cctggcacagaccagggagaaagaggtgatcctgggctcccgggttaccctggaacccct
ggcaggaaaggagaaccagggatccccggaggccccggaatctcgggcagtcctggcttc
aaaggactacaaggggacactggattcagcggcggtccaggtcttaagggtttttctggt
gacccaggctattacggaagcaaaggagccaagggcttccgaggccctgcgggtccgaag
ggtcgccctggtatcacactccccgggacatttcagcagtttgagcgacccttcggagac
ggcggtcctccaggtggacctggaccccgtggtttcactggagtgaccggtcagcctggg
atgcctggacagccaggttcaaagggacgtcccggttctgttggtaaactgggccgcact
ggttctgttggtctgcctggaccagttggtgacccgggtcctccgggtttccctggaccc
actggagaacaaggccttcccggtaccgtcggtcgtcccggcggtcccggctccgtgggg
cgcagcatcagtatcggctacactctggtgaagcacagccaaaacgtgcaggttccaatg
tgtcctcagggcatggccaaactgtgggacggttacagcttgctttacgtggagggtcaa
gagaaggcacacaaccaggacctcggtcagccggggtcctgcctacccaggttcagcacc
atccccttcctctactgctcccccaacgaggtgtgctactacgccagccgcaatgacaaa
tcttactggctctccaccaccgcgcccatccccatgatgcccgtggcccagattcagata
cggccttacatcagcaggtgttcggtgtgcgaggcgccgtctcaggcggtggcagttcac
agtcaggacttgaccattcctaattgcccccctggctggaggagtctctggataggctac
tccttcctcatgcacacagcggccggggccgaaggcggcggccagtccctggtatccccc
ggctcgtgcctggaagatttccgggcgacgccgttcattgagtgcaacggcgccaaaggg
acgtgccattacttcggcaacaagtacagcttctggctgaccacggtggatcccaaccgc
gagtttgtctactcgccggcgcaggagaccctgaagggaggccaagagcgctccaaagtc
agcagatgccaagtgtgcagcaaggtcttgtag
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