Phyllopteryx taeniolatus (common seadragon): 133475370
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Entry
133475370 CDS
T09737
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03013
Nucleocytoplasmic transport
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133475370 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
133475370 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133475370 (thoc5)
03041 Spliceosome [BR:
ptao03041
]
133475370 (thoc5)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133475370 (thoc5)
Spliceosome [BR:
ptao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133475370 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
133475370
NCBI-ProteinID:
XP_061624100
LinkDB
All DBs
Position
3:complement(27497655..27505603)
Genome browser
AA seq
708 aa
AA seq
DB search
MSSDTLKKRKAKVLRNEAATPEVKRGRGDADHQDVRIYNEEVELDGRDHEEDFLQFKESC
EGLATLMGEIQKLKANGAKDGSAEIERRRLQSCNQFMTLKKLNRLAHMRLKRGRDQTHEA
KQKVDVLHLQLQNLLYEVLHLQKEISKCLEFKSKHEEIDLVSEEDFYKDAPQEISRPQLT
KNDPHQLTLARLDWELEQRKRLAETYKESQATKEKIQKSIEVKKEHLRSLQPGLNAIMQA
SLPVQEYLAVPVEQTQKHTEVAQHLPPPLYVLFVQANAYGQACDKNLSVSISGDVDEAKA
MSKPPEDSQDDDSDSDAEEEQEKTKRRRPTAGGQLDDKRREMLKRHPLSLSFDLTCKDGS
ILNLYFYYLINLNVMTVKAKISASTDLTTAISAGELVKSETILSCLYSNDHGRETPNPAN
RYQFDKVGIVSFADYVEELGHPYKWVQSLGGLHFPSDSSEGVLVGSSLSASHMETTMKLL
RGRVLSRLALHKQFASLGKVTVDRARLSGAYEELRLFLLSTEHNIIPVISECLHLFPTKI
ISRLAQWTTITHEEYKELTFTRHVTDAGLAKETDMYFSGVIERGTARLQAAVVLNPRYPE
ISPLFSLSLSWKGERSGRSDDNLRAMESEVNVFKNELRGPRPGYQVLTNQISRLCVCLDV
YLETEEQDDGVEGPREFPREKMCLRTVKGPNRLKPFKYNHPLGLFSHR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagacacactgaaaaagcgaaaggctaaagttcttcgtaacgaagcagcaact
cctgaggtgaagcgaggcagaggcgacgcagaccaccaggatgtacgtatctacaatgaa
gaggtggagcttgatggcagggaccatgaggaggacttccttcagtttaaagagtcgtgt
gaaggtttagccactctgatgggtgaaatacagaagctcaaagccaatggggcaaaagat
gggtctgctgagattgaacggcgacgcttgcagagctgcaaccaattcatgactttgaaa
aaactcaaccgtctcgctcacatgcgactgaaaaggggcagagaccagacccacgaggca
aagcagaaagtggatgtgctgcacctccagttgcagaatcttctgtatgaagttctgcat
cttcagaaggaaatcagcaaatgtttagagttcaagtctaaacatgaggaaatcgacctc
gtgagcgaagaagacttttacaaggatgcgccgcaggagatttccaggccacaactcacc
aaaaacgatccgcaccagctcacactggcacgattagactgggagctcgaacagaggaaa
agattggcagagacatacaaagagtctcaggccaccaaggagaagatccagaagagtatt
gaggtcaagaaggaacacctgaggagcttgcagcctggtctgaatgccatcatgcaggcc
tctctcccagtgcaagagtaccttgccgtgcctgttgaacagactcagaaacacactgag
gttgctcagcacctgccaccgcctctctatgtcctctttgttcaagccaatgcatatggc
caagcatgcgacaagaacctgagcgtgtccatcagtggggatgtagatgaggccaaggct
atgtccaaacctccagaggattctcaggatgatgacagtgactccgacgcagaggaagag
caggaaaaaactaagaggagacggccaactgctggcggccagctggatgacaaaaggcga
gagatgctcaagaggcacccgctgtccctctctttcgacctgacgtgcaaagatggcagc
atcctcaatctctacttctactacctgataaacctcaacgttatgacagtcaaagctaag
atttctgcgtccacagacctcaccacagccatcagtgcaggggagctggtcaaatctgaa
accattctcagctgtctgtattccaacgatcatggaagagaaacacccaatccagccaac
cgttatcagtttgataaagttgggattgtttcttttgctgactatgtggaggagctgggt
catccctacaagtgggttcagagtctcggaggtctacattttccaagtgactcctcagaa
ggtgtgcttgtgggcagttcattgagtgctagccacatggaaaccaccatgaagctcctg
agggggcgggtcctgtcccgcttggctttgcataagcagtttgcctctttaggtaaagtt
accgtcgaccgtgcacgtttaagtggtgcttatgaagagctgaggttgtttcttctctcc
acagagcacaacatcatccctgtcatcagtgagtgtctgcacctctttccaaccaagatt
atttcccgcttagctcagtggaccaccatcacacacgaggagtacaaggaattgacattt
acacgccatgtgacagatgctggtctggcaaaagagactgatatgtacttttctggagtt
attgaaagaggcacagctcgtctccaggctgcagtggtgctgaatcctcgttacccagaa
atctctcccctcttctcactctcgctcagctggaagggagagcgcagcggacgatctgat
gacaaccttcgggccatggagagcgaggtgaacgtgttcaaaaatgaactgcggggtcca
cgtccaggctatcaggtcttgaccaatcagatttcacgcctgtgtgtctgtctggatgtc
tacctggagaccgaagaacaggatgacggcgtggaaggaccacgcgagtttccccgagaa
aagatgtgcctgcgtactgtgaagggtccaaatcgcctgaagccattcaaatacaaccat
cctctgggcctcttcagtcatcgctaa
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