Phyllopteryx taeniolatus (common seadragon): 133475682
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Entry
133475682 CDS
T09737
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03030
DNA replication
ptao03410
Base excision repair
ptao03420
Nucleotide excision repair
ptao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133475682 (rfc5)
03410 Base excision repair
133475682 (rfc5)
03420 Nucleotide excision repair
133475682 (rfc5)
03430 Mismatch repair
133475682 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptao03032
]
133475682 (rfc5)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133475682 (rfc5)
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133475682 (rfc5)
DNA replication proteins [BR:
ptao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133475682 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
133475682 (rfc5)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133475682 (rfc5)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133475682 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
133475682 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
AAA_16
RCF1-5-like_lid
AAA_24
AAA_14
RuvB_N
AAA_assoc_2
DEAD
ResIII
ATPase_2
AAA_30
AAA_7
DUF815
PhoH
AAA_5
TIP49
AAA_19
Thioredoxin_6
AAA_3
Mg_chelatase
AAA_2
DNAX_ATPase_lid
Glyco_hydro_57
Motif
Other DBs
NCBI-GeneID:
133475682
NCBI-ProteinID:
XP_061624897
LinkDB
All DBs
Position
3:complement(33001606..33008265)
Genome browser
AA seq
335 aa
AA seq
DB search
MASTAKAPPQARNLPWVEKYRPQKLDDLISHADILSTIQKFISEGRLPHLLFYGPPGTGK
TSTILACAKQLYKDREFNSMVLELNASDDRGIDVVRGPVLSFSSTRSIFKKGFKLVILDE
ADAMTQDAQNALRRVMEKYTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
RHVIRQESIDITPDGMKALVTLSAGDMRRSLNILQSTSMAYGRVSEDTVYTCTGHPLRSD
IANILDWSLNKDFNTAYKQILELKTLKGLALQDILTEVHLLIHRVDFPSSVRMGLLIRLA
DVEHRLAAGTNEKIQLSSVVAAFQSVRDLVVGEAR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccgcaaaagcaccgccgcaggccagaaacttaccctgggttgaaaaatac
cgaccgcagaaactagacgacctgatctcacacgcagacattctcagcaccatccagaag
ttcatcagcgagggccgactgccgcacctgctcttctacgggccgcccggaaccggcaag
acttccaccatcttggcctgtgccaagcagctgtacaaggacagggagttcaactccatg
gttctggagctcaacgcgtccgacgaccgaggcatcgatgtcgtgcggggacccgtcctg
agcttttccagcaccagaagcatcttcaagaaaggcttcaagttggtgatactggacgag
gccgacgccatgacccaggacgcccagaatgcgctgcggcgggtgatggagaaatacacc
gagaacactcgcttctgcctgatctgcaactacctgtcgaaaatcatcccggcgctgcag
tctcgctgcacccgcttccgcttcggaccgctgtcgccggaccagatgatacccagactg
cggcacgtcatccggcaggagagcatcgacataactccagacgggatgaaggcgctggtc
acgttgtcggcgggcgacatgcgaagatcgctcaacatcctgcagagcaccagcatggcg
tacggccgcgtgagcgaggacacggtgtacacgtgcacggggcacccgctacgctccgac
atcgccaacatcctcgactggtcgctcaataaagacttcaacaccgcctacaagcaaatc
ttggagctgaagacgttgaaaggtttggcgctgcaagacatcctcaccgaagtgcacctg
ctcatccacagagtggacttcccgtcttcggtccggatgggtctgctcatcaggctggcc
gacgtggagcaccggctggcggcgggcaccaacgagaagatccagctgagctccgtggtg
gcggcgttccagtccgtccgcgacctggtggtcggcgaggcccggtga
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integrated database retrieval system
