Phyllopteryx taeniolatus (common seadragon): 133475786
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Entry
133475786 CDS
T09737
Symbol
smarcb1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03082
ATP-dependent chromatin remodeling
ptao03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133475786 (smarcb1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133475786 (smarcb1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptao01009
]
133475786 (smarcb1a)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptao03021
]
133475786 (smarcb1a)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133475786 (smarcb1a)
Protein phosphatases and associated proteins [BR:
ptao01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133475786 (smarcb1a)
Transcription machinery [BR:
ptao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133475786 (smarcb1a)
SWI/SNF complex
133475786 (smarcb1a)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133475786 (smarcb1a)
PBAF complex
133475786 (smarcb1a)
SWI/SNF complex
133475786 (smarcb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
133475786
NCBI-ProteinID:
XP_061625189
LinkDB
All DBs
Position
3:10914930..10921951
Genome browser
AA seq
373 aa
AA seq
DB search
MALSKTFGQKPVKFQLEEDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRKLASVEERKKI
VESSHDHGYTQLATSVTLLKACEVDEILDGNDDKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRSRLGRDKKRTFPLCFDDHDPAVIHENATQSEVLVPIRLD
MEIEGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLAFVPAIASAIRQQMESYPTDS
ILDEQTDQRVIIKLNIHVGNISLVDQFEWDMSERENSPEKFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaagcaagacgtttgggcagaaacctgtcaaattccaactggaagaggatgga
gatttttatatgatcggctcggaggtgggcaactacctgcgcatgttccggggttccctg
tacaaacgatatccgtccttatggaggaagttggcgtcggtggaggagcgcaagaagatc
gtggagtcgtcgcacgatcacggctacactcagctggccacgagcgtcacgctgctcaaa
gcctgcgaggtggacgagatcctggacggcaacgacgacaagtacaaagccgtgtccatc
agcacagagccgccggcgtacctcagggaacagaaggccaagcggaacagccagtgggtc
cccacgctgcccaacagctctcaccaccttgacgccgtaccctgctccaccaccatcaac
cggagccgcctgggccgagacaagaaaaggaccttcccgctctgctttgacgaccacgac
ccggcggtgatccacgagaacgccacccagtcggaggtgctggtccccatccgtctggac
atggagatcgagggccagaagctgagagacgcgttcacctggaacatgaacgagaagctg
atgactcccgagatgttttcggagattctgtgcgacgacctggacctgaaccctttggcc
ttcgtgcccgccatcgcttccgctatccgccagcagatggagtcgtaccccaccgacagc
atcttggacgagcagacggaccagagggtcatcatcaagctcaacatccacgtgggcaac
atctccctggtggaccagttcgagtgggacatgtcggagagggaaaactctccggagaag
tttgcgctcaagttgtgctcggagctgggcctgggaggcgagttcgtcaccaccatcgcg
tacagcatcagggggcagctcagctggcaccagaggacgtacgccttcagtgagaaccct
ctcccgacggtggaaatcgccatcagaaatacgggtgatgccgaccagtggtgccccctg
ctggagacgcttacagacgccgagatggagaagaagatcagagaccaggacagaaacacc
aggcgaatgaggcgacttgccaacacggcgccggcctggtag
DBGET
integrated database retrieval system
