Phyllopteryx taeniolatus (common seadragon): 133477501
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Entry
133477501 CDS
T09737
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133477501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptao03041
]
133477501
03009 Ribosome biogenesis [BR:
ptao03009
]
133477501
Enzymes [BR:
ptao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133477501
Spliceosome [BR:
ptao03041
]
Complex A
U2 snRNP components
U2 related factors
133477501
Complex B
133477501
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133477501
Ribosome biogenesis [BR:
ptao03009
]
Eukaryotic type
90S particles
Helicases
133477501
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
nSTAND3
AAA_29
Atrophin-1
AAA_7
RSB_motif
DUF3915
Motif
Other DBs
NCBI-GeneID:
133477501
NCBI-ProteinID:
XP_061628299
EnsemblRapid:
ENSPTLG00010005353
LinkDB
All DBs
Position
4:8722136..8744891
Genome browser
AA seq
763 aa
AA seq
DB search
MSKRHRLDLGDDYSSKKRSEGRDRDSDRDRGDHSRDRDRDRDRDRDRDRDRERDMKSSSA
PPKIMPAVIPMPQLKQMAMQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKENFTDIITR
HQSFVLVGETGSGKTTQIPQWCVDMVRSIPGPKRAVACTQPRRVAAMSVAQRVADEMDVM
LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL
MGVLKEVVRQRADLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYL
EAAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL
PPQQQQRIFEPPPPRKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIR
VESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVL
QLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLA
KMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYH
AFKQNHEANQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRA
LCTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTD
IKPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLESKEYSQY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagacatcgtttggatttgggcgatgactactccagtaagaagaggtctgaa
gggcgtgacagagactctgatcgagaccggggggatcattccagagacagagacagagac
cgggatcgagaccgcgacagggaccgagaccgcgaaagagatatgaagtcttcaagcgca
ccacctaaaatcatgccagctgtcatccccatgcctcagctgaagcagatggccatgcag
cagcagatcaatccgttcaccaacctgccgcacacgccccgctattatgaaattctgaag
aaaaggttacagcttcccgtgtgggagtacaaggaaaacttcactgacatcattacacgc
catcagagctttgtccttgtaggagagactggctctgggaagacgacacaaatccctcag
tggtgtgtcgacatggtgaggagcattcctggtccgaagagggcggttgcctgtactcag
ccaaggagagtggcagccatgagcgtggcgcaaagagtggcagatgaaatggacgtgatg
ctcggacaggaagtgggctactccatccgatttgaagactgtagttctgccaaaacaata
ctgaagtacatgacagatggtatgttgttgagggaggcgatgaatgaccctcttctggag
cgatatggagtgattattctggacgaggcccacgagcgaacactagccaccgatattcta
atgggagtgctgaaggaggtggtgcgtcaacgagcagatctaaaggtgatagttatgagc
gccacactggatgcagggaagttccaggtgtactttgacagttgtcccctgctgacaatt
cctggccgcacgcacccggtagagatcttctacacgcccgagccggagcgagactacctc
gaagccgccattcgcacagtcatccagattcacatgtgtgaggaagatgagggggattgt
cttctcttcctcactggtcaagaggaaattgatgaagcgtgcaaacggatcaagcgtgag
gtggatgaccttgggcctgaagttggagacatcaaaatcattccactatattcaacgttg
ccaccacagcagcagcaaaggatctttgagccaccacctccacggaaagctaatggtgca
ataggaagaaaggttgtggtgtcaacaaatattgctgagacctctctaacaattgacggt
gtggtctttgtcattgatcctggctttgccaaacagaaggtatacaaccctcgcatcaga
gtggaatcgctgctggtcaccgccatcagtaaagcgtctgcccagcagagggcaggacga
gccggcagaacccggccagggaaatgtttccgcctgtatacagaaaaagcctacaaaaca
gagatgcaggataacacatacccagaaatcctgcgatccaacttggggtctgtggtgctg
caattgaagaagttgggcatcgacgaccttgtgcactttgacttcatggatccaccagct
cctgagaccctgatgagagccttggagctactcaactacttggccgcgctcaacgacgat
ggcgacctgaccgagctgggctccatgatggcagagttccccctcgacccccagttggcc
aagatggtcatcgcgagctgcgagttcaactgctccaacgagatcctttccatcactgcc
atgctgtcagtcccacagtgttttgtgcgccccacggaggcaaagaaggctgccgatgag
tccaagatgaggttcgcccacatcgacggcgaccacttgactctactcaatgtctaccac
gccttcaagcagaatcacgaggcgaaccagtggtgctatgacaactttgtcaactatcgt
tcgctgatgtccgccgacaatgtacggcagcagctgtccaggattatggaccgcttcaac
ctgccccgccggagcacagagtttaccagtcgagactactacatcaacatccgcagggca
ctctgcaccgggttcttcatgcaggtggcccatctggaacgaaccggtcattacctcaca
gttaaagacaaccaagtggtacaactgcacccatccacagttttggaccacaagcccgaa
tgggtgctctacaacgaatttgtcctcaccaccaaaaactacattcgtacttgcacagac
atcaaaccagagtggctggtgaagatcgccccccagtactatgagatgagtaacttccct
caatgtgaagctaaacgacagctggagcgaatcgttgccaaactagagagcaaagagtat
tcccagtactaa
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