Phyllopteryx taeniolatus (common seadragon): 133477676
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Entry
133477676 CDS
T09737
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133477676 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133477676 (edc4)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133477676 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
133477676 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EDC4L
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Usp-48
WDR55
Pdc1_Ge1
Sey1_3HB
AI-2E_transport
ApoLp-III
AAA
Motif
Other DBs
NCBI-GeneID:
133477676
NCBI-ProteinID:
XP_061628675
LinkDB
All DBs
Position
5:complement(11551000..11622107)
Genome browser
AA seq
1322 aa
AA seq
DB search
MSDSPRPISAVNSIAQDIQIIRLSGDDQSTCIPITSDNVEIVASQDSSINSKARGSNMVK
IQPVAKYDWEHKYHYGRLIAVSNSFTAYAIRGANNQAMIRVLSVDTAERSLLKGFTGAVT
DLAFAHLDSPLLGCVDEAGNLMVWELTCTSSTILDQIVVHIRRPSDTPLNLHRRLIWCPF
IPDDNEDNPDDTSQTLALLHEDRAEVWDLEVLRANNARWPVDATDLKEGLITVKGYTQHV
SEGALSPDGTVLATASHDGYIKFWQIYIEGGQDKPRCLHELRPHGGRPLSCLLFCDNHKR
QDPEVPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPMNLTVLPSLKASLDLSAEY
LILTDVQRKVLYVMELRQDLEKGKATFTAVSEFLLTHPVLSFGVQDVAQSPLRHTEVLPA
EEESESATTEGAQGPTESKSGIQIKLYCVHTKSLQDVQIWFQPNAGSNSTGLPHSDPPDS
FGFSDHLTDQSSDKDSGSDPQIDLRNMSSLPGPADFLSNTTNGNGRMPKLMTPDAFMTPS
TSVPASPGSSASSLTIVTAISSNSTDSTNRTSDDISQSPNRADNSLSLPASTSSPRSAST
VLPGLETIGAPASPSTPIVLDNPQVLGSPLIQPLASPTRARSPDVISSASTVMSQDIPEI
ASQTLQLQRGHVSTLDSLPLSAFQTDSMASAASALHLLTSPRSANSNSLLHLELGCVDGP
AGGSLELEPRLNQTPSLLETASSQENPGLAGGSTEKSISHTSWPAAPDITRETRNRDNSL
GDCSRDESNDRLLGSPYACRTYHISQNDSQDPGAEQSDPEDEVAGSTSSSANCGTRPTHR
LPVKDWKTSPRCSPKLKRKTKKDGSESPQSRQLDSGQMNTDVQQELLMFLRGQQRELTEL
RGQIEAMQSSIMAQVERALTIHQEQEHCRLEQVLAETRNQQHHQEELSQQLSHTLCNSLT
NRMDKVIREEMKKTVPPSISKCLEPVTSQLSNTISSKMTSVEVTLKDNVSKVVKSKNTTD
AIGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGTQEYIQQLEAHA
KSRKQREQETRDPMIDQLQQMMDGFQSSTDQLANSMTSNIRAEIQHQIQMMVGNLQESIL
SHVQRIVKGEVSLAMKEQQAVVTSSIMQAMRSAAGTPVPTAHLDYQTQQANILQLLQQGQ
LNQAFQQALSATDLNLVLYVCETIDSQQVFGQQPCPLSQPVLLSLIQQLSSNLNTRSELK
ISYLEDALMNLDHSDPRTRDHMASVLTQVRPKLFAFMQQDPHSPLTKRARRLMMMLQGLV
NH
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactcgcccagaccaatctccgcagttaacagcattgctcaggatatccagata
atccgcctttcaggtgatgatcagtctacttgtatccccatcacctcggataatgtggag
attgttgccagtcaggactcaagcatcaatagcaaagctcgaggtagcaacatggtgaag
attcagcctgttgccaaatatgactgggagcacaagtaccattatgggagacttattgct
gtgtcaaattctttcacagcgtatgcaattagaggagccaacaaccaggctatgatacgt
gtcttgagtgtggacacagcagagcgttcccttctgaaaggcttcaccggtgctgtcaca
gatctggcttttgcccaccttgactcacctctgttgggttgtgtagatgaagctggcaac
cttatggtttgggagctcacatgcaccagcagtacaatattagatcagatagttgttcat
atccgaaggccatcggacactccactgaacttgcatcggcgtctcatctggtgccctttc
attccagatgataatgaggacaacccggatgacaccagccagaccttggcccttctgcat
gaagacagggctgaagtgtgggaccttgaagtcttaagggccaacaatgctcgttggcct
gttgatgccacagatttgaaagaaggcctcatcacagtgaagggatatacccagcatgtc
agtgaaggtgccctatctccagatggaacagtgttagccacagccagtcatgatggatac
atcaagttctggcagatatatatagaaggggggcaggacaagccaagatgtcttcatgaa
ttgcgtcctcatggtggacgtcccctttcctgccttcttttctgtgacaaccacaaaagg
caggaccctgaggttcctttctggaggtttcttatcactggagcggatcagaaccaagaa
ttaaagatgtggtgtactgtttcctggacctgtttgcagaccatcagattctctccagat
ccaatgaacttaacagttctgccaagtctcaaggcaagtttggacctgtccgctgagtat
ctcatccttactgacgtacagaggaaggttctttatgtgatggagctgagacaagatctg
gaaaaagggaaagcaactttcactgcagtgtcagagtttctactgacccatcctgtgctt
agctttggagttcaagatgttgcccaaagccctttgcgacatactgaagttcttcctgca
gaggaggaaagtgagagcgcaacaacagagggagctcaaggacccacagagtccaaatct
ggcatccagattaaattgtactgtgttcacaccaagagtctgcaggatgttcagatctgg
ttccagcctaatgcgggatcaaactctactggcctgccccattctgatcctccagatagt
tttgggttttcagaccatctgacagaccagagttctgacaaggactcaggaagtgacccc
cagatcgacctgagaaacatgtcatcgcttcctggacctgctgacttcttgtcaaacaca
acgaatggcaacgggcgaatgccaaagttgatgactcctgatgccttcatgacaccaagc
acttcggtccctgcatctcctggcagtagtgccagtagtctgacaattgtaacagcaatc
agcagcaactcaactgactctaccaatagaacttctgatgacattagtcagagtcccaac
cgggccgataatagtttgtcacttcctgcttccactagcagtcccagatctgcttccact
gtcctgcctggactggagacaataggggcaccggcatcccccagcactccaattgtgctt
gacaaccctcaggttcttggttcgccactcattcaaccccttgcctctccaactagggct
cgctcccctgatgttatctcctcagcctcaacagtcatgtcacaggacattccagagatt
gcatctcagaccctgcagcttcagcgtggtcatgtgtccaccttggactccttacctctg
tctgcttttcaaactgatagtatggcctctgctgcctctgcccttcacttgctcacttca
ccacgctcagccaacagcaacagcctgttgcaccttgagcttggatgtgtagatgggcct
gctggagggtctctagagttagagcccagacttaaccaaacaccatctctcttggagact
gcttcatcacaggaaaaccctgggttagcaggagggtctacagagaagagcattagccac
acctcatggccagctgctcccgacattaccagggaaaccaggaatagagacaatagtctt
ggagactgctccagggatgagtcaaacgacagactcctgggttcaccctatgcatgtcga
acctatcacatttcacagaatgacagtcaggaccctggtgctgagcagagtgaccctgag
gatgaggtggctggttcaacatcttcatctgcaaattgtggcactcgccccactcacagg
ctaccagttaaagactggaagacctcacccagatgctcgccaaagcttaagagaaagacc
aagaaagatgggagtgaatcacctcagtcgagacaattggactctggtcagatgaataca
gatgtgcagcaagagttgttgatgtttctcagagggcaacagagagagttaactgagcta
cgtggacaaattgaagccatgcagagctccataatggcccaagtcgagcgtgcgctgacc
attcatcaggagcaagaacattgcagactagagcaggttctggcagagactcgaaatcag
cagcaccatcaggaagaactcagccagcagctgagccacacactctgcaattccctaaca
aacaggatggacaaagtcattcgagaggagatgaagaaaactgttccgccaagtatttcg
aagtgtctggagccagtgacatctcagctgagcaacactatatcttctaagatgacctct
gtagaggtcaccctaaaggacaatgtcagcaaggttgtcaaatccaagaacacaacagac
gcaattggccgagccgcagcagaggcaatgcaaggtcctatccaggctgcctataaagat
gccttccagagcattgtgctgcctgtttttgagagaggctgccagtccatgtttcagcaa
attaatgacagtttcaagcaaggaacacaagaatacatacagcagctcgaggcccatgcc
aaaagcaggaaacagagagagcaggaaacccgagaccccatgattgaccaactgcaacaa
atgatggacggcttccaaagctccactgatcagctggccaatagcatgacatctaacatc
cgggctgagatccaacatcagattcagatgatggtgggaaatttgcaggagtcaattcta
agtcatgtacagcgcattgtcaaaggcgaggttagcctggcaatgaaggagcagcaggca
gtggtgacttcaagcattatgcaggcaatgagatctgcagcaggtacccccgtccctaca
gcacatctagactaccagactcagcaagcaaacatcctgcagctccttcagcagggacag
ctcaaccaagctttccagcaggctctctcagctacagatctgaacttggtcttgtatgtg
tgtgagaccattgactcccagcaggtgtttggacaacaaccctgccctctcagccagcct
gtgctcctgtcactcatacaacaactgtcatccaacctcaatactcgctctgagctcaaa
atcagctacttggaggacgcattgatgaatctggaccacagtgatcctcgaacgagagat
cacatggcctccgtgctgacccaagtcagaccgaagctctttgccttcatgcagcaggac
ccccacagccctcttaccaagagagcacgacgcctcatgatgatgctacaagggctcgtc
aaccactag
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