Phyllopteryx taeniolatus (common seadragon): 133478550
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Entry
133478550 CDS
T09737
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptao03009
]
133478550 (ighmbp2)
03012 Translation factors [BR:
ptao03012
]
133478550 (ighmbp2)
Enzymes [BR:
ptao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133478550 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
133478550 (ighmbp2)
Ribosome biogenesis [BR:
ptao03009
]
Eukaryotic type
Other ribosome biogenesis factors
133478550 (ighmbp2)
Translation factors [BR:
ptao03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133478550 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
DEAD
Viral_helicase1
nSTAND3
ResIII
UvrD-helicase
IstB_IS21
Helicase_RecD
AAA_16
AAA_22
SLFN-g3_helicase
Flavi_DEAD
ABC_tran
AAA_25
DnaB_C
Zot
AAA
PhoH
NPHP3_N
AAA_28
ATPase
HEM4
UvrD_C_2
AAA_31
UvrD_C
Motif
Other DBs
NCBI-GeneID:
133478550
NCBI-ProteinID:
XP_061630708
LinkDB
All DBs
Position
5:30050103..30063443
Genome browser
AA seq
990 aa
AA seq
DB search
MAVEKFVSTTLELLQEEREAELEETRVWKENISHKELQNKGVCLLKLHIGSQSTGLYGRT
VVVFEPRKHLGFSCLPSNSFGPGDIVGLYDSGGCSGTSQISTGIVRRVHQASISVAFDDS
NDGLSFETEALYSLLKLANDVTYKRMKRALYVLNGYSNGPSANLIGVLFGEAKPSSHSQP
QEVKFFNANLDPSQREAVTFALSQRELAVIHGPPGTGKTTTVVEIILQAIKQGQKVLCCA
PSNVAVDNLVERLARCKAKVLRLGHPARLLESIQKHSLDAILARSDNANIITDIRRDIDK
AFLGMRKKNEKGEHVNYRREVGELRKELKTREATAIAQILKSADVVLSTNTGACDDGPLK
FLTAEHFDWVVIDECAQSLESSCWISLLRARKCTLSGDYKQLPPTIKSHVAASKGLSLSL
MERLIQMYGDSVVRMLTVQYRMNSAIMDWASKEMYQGRLTAHSSVEAHLLKDLPGVTCVE
ETSTPLLLIDTAGCGLTEMEIAGEQSKGNQGEVDIVALHIKALTEAGVNAKDIAVIAPYN
LQVDLLRQKLSARHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRHVAIVCDTQTVQHHAFLKTLIHHVTECGDVRTAFEYLQDIVPQNYSRDHKDTKPCI
LTTQKVEGKKVKAVQKKTSGSNTRIGKKHDKPLKSRVSVLTEEEQMKNRQSEIREMVENF
LKNLSQSELDFPPSFNSHDRLLVHQIAEELGLVHQSKGEGKDRYITVSKHVNSKPDHPTA
RETKEDEQESDKSEGAAVSQEQDIPQPPSKESSCQPQLDFKSLHLERMNREQQKREENAQ
QKKQQNISVVTKKSTAIKGKKRTKAGACDIAASSSPGDDFDTLISAVVKADSVCSFVKCK
ASVLTLGQLCLFCNRQYCLSHHVPEVHGCGDQAKTQARMRISKEGILYAGSGTKEKSMDP
NKKAYLHRKLDSKLKDMATQRKTKNKEKDG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgaaaaatttgtttcaacgacactggagcttctgcaagaagagagggaggct
gaactagaggaaaccagggtgtggaaggagaacatatcgcacaaagaacttcaaaacaaa
ggagtgtgcctgcttaaacttcacataggaagccagtccactggcctgtacggtcgaaca
gtagtagtcttcgagccaagaaagcatcttggcttctcatgtcttccgagcaatagcttt
ggacctggggatatagttgggttatatgactccggtggatgcagtgggacgtctcagatc
agcacaggcattgtgagacgagtccaccaggcctcaataagtgtggcttttgacgattca
aacgatgggctcagttttgagacagaggctttatatagcctcttaaagttggcaaatgat
gtgacttataagcgaatgaaaagggctttatatgtgttgaatggatacagtaacggaccg
tctgcaaatctgatcggtgttctctttggagaagccaaaccttcttctcattctcagcca
caggaggtcaaattctttaacgccaacctggatccttctcagagagaagcagtgactttt
gcactgtctcagagagaactggcagtgattcatggtcctccaggcactgggaaaaccacc
acagtagtggagatcattctgcaagctatcaaacagggccaaaaggtcttgtgctgtgcc
ccgtcgaatgtggcggtggataatttagttgagagattagcccgctgcaaggccaaagtt
ctgaggctcggtcaccctgccaggctgctggagtctatacaaaaacattcgctggatgcc
atcctcgccagaagtgacaatgccaacatcatcaccgacattcgcagggacattgacaaa
gcttttctgggtatgagaaagaaaaatgaaaaaggagagcacgtgaactacaggagggaa
gtaggtgaactaagaaaagagctgaaaaccagggaagcaacggccatcgcccagattctt
aaaagcgccgatgttgtcttatcaaccaatacaggtgcatgtgatgacgggcctctgaaa
ttcctgacagctgagcattttgattgggtggtgattgatgagtgcgctcagtcactggag
agcagctgctggattagcctgctccgagcgcgcaagtgcactctgtccggagactacaag
cagttaccacctaccatcaaatcacacgtggcagcttcaaaaggcttgtctcttagtcta
atggagagactcatccaaatgtatggagactcagttgtgcgaatgctcacagtccagtac
cgcatgaacagtgccatcatggactgggcctccaaagaaatgtaccagggaagactgacg
gcacacagctcagtggaagcacacttgttaaaagatctgcctggggtcacctgtgtcgaa
gaaaccagcacacctcttcttctcatcgacacagccggctgcggtctgacagaaatggag
atagcaggagagcaatccaaaggcaaccaaggtgaggtggacatcgtagctctgcacatt
aaagccttgactgaagctggggtgaatgccaaagacatagctgttattgctccttacaat
ttgcaagttgaccttttgcgtcagaaactttctgcaaggcatccagagctggaaatcaaa
tcagtggatggctttcaaggcagagagaaagaagctgtggttttgtctttagtccggtcc
aataggaaaggtgaagtgggatttctggcagaggacagaaggataaacgtggctgtcaca
cgtgcgagacgtcacgtcgccattgtgtgtgacacccagacagttcaacatcatgctttc
cttaagacactgatccatcatgtcactgagtgtggggatgtacgaacagcatttgagtac
ctacaagacattgtaccgcagaattacagccgtgaccacaaagacacaaagccttgcatt
ttgaccacacaaaaggttgagggaaagaaagtcaaagcagttcagaagaaaacaagtgga
agtaacacaagaattggtaaaaaacatgacaaacccttaaagtcacgtgtatcagtgctc
accgaggaggaacagatgaagaaccgacaaagtgagatcagagagatggtggaaaacttt
ctgaagaacctcagtcagagtgagctagactttccgccgtcattcaactcccatgaccgc
ctgttggtgcaccagatcgctgaagagctgggcctcgtgcaccagagtaaaggcgagggg
aaagacaggtatatcactgtctccaagcatgtgaactcaaaaccggatcacccaacagca
cgagagactaaggaagatgagcaggaaagtgacaaaagtgagggagctgcagtttctcag
gagcaggacattcctcaaccaccctcaaaagaatcatcatgtcaacctcaattagatttt
aaaagtttacatttggagcgaatgaatagggaacagcagaaaagggaagaaaatgctcaa
caaaagaagcagcagaacatttcggttgttacaaagaagtccacagccattaaaggaaag
aagcgaaccaaagcaggcgcatgcgacattgcggcatcctcttctccgggcgacgacttt
gacaccctcatcagcgccgtggtgaaggcagacagcgtgtgcagttttgtcaagtgtaaa
gcctccgtgctaactcttggacagctttgtcttttctgcaacaggcaatattgtctcagt
caccacgtaccagaggttcacggctgtggagaccaagcaaagactcaggctcgaatgaga
ataagcaaggaggggattctttacgccggcagcgggacaaaagaaaaatccatggacccc
aataagaaagcttatctacacaggaaactggactctaaactcaaagatatggcaacacag
aggaaaacaaaaaacaaagagaaggatggttaa
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