Phyllopteryx taeniolatus (common seadragon): 133478639
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Entry
133478639 CDS
T09737
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133478639 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptao03021
]
133478639 (sf3b3)
03041 Spliceosome [BR:
ptao03041
]
133478639 (sf3b3)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133478639 (sf3b3)
Transcription machinery [BR:
ptao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133478639 (sf3b3)
Spliceosome [BR:
ptao03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
133478639 (sf3b3)
Complex B
133478639 (sf3b3)
Complex C
U2 SnRNP specific factors
133478639 (sf3b3)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
133478639 (sf3b3)
TFTC complex
133478639 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
133478639
NCBI-ProteinID:
XP_061630906
LinkDB
All DBs
Position
5:complement(31891912..31936260)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKMQEIVVSRGKIIELLRPDANTGKVHTLLTMEVFG
IVRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDATGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMFCQIADLANEDT
PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVKMQGQDAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGAGQWASLVRLVNPIQGATLDQVQLEQNEAAFSVAVCRFHNAG
DDWYVLVGVARDMILNPRSVGGGFIYTYRLIGGGEKLEFVHKTPVEDVPLAIAPFQGRAL
VGVGKLLRIYDMGKKKLLRKCENKHVPNLVTGIHTIGQRVVVSDVQESLFWVRYRRNENQ
LIIFADDTCPRWVTTACLLDYDTMASADKFGNITIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGSSQKADVVVNYHVGETILSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacatcactctacagcgcgccactggcatcacgcatgctatccatgga
aacttctctggaaccaagatgcaggagattgtagtttccagaggaaagatcatagagttg
ctgcggccagacgcaaacacgggaaaggtgcacacactgctcacaatggaagtgtttggt
attgtgcgttcactaatggccttcagactcacaggaggaaccaaagattacattgttgtt
ggaagtgacagtggtcgtatcgtcatcttggagtaccatccgtccaaaaacatgtttgag
aaaatccaccaggagacatttgggaagagtggttgtcgtcgtattgtcccaggacagttt
ttggctgtggaccccaaaggcagagctgtcatgataggagcaatagagaaacagaagttg
gtttatattctgaacagagatgcagcagcacgactgaccatctcatccccactggaggcc
cacaaagcaaacacactggtctaccatgtagtgggtgtggacgtcggctttgaaaatccc
atgttcgcttgtcttgaaatggactatgaggaagctgacaatgacgctaccggagaagct
gctgccaacacgcaacagacgctcactttctatgagctggaccttggcttgaaccacgtg
gtccgcaagtacagcgaggctttagaagaacacggaaactttctcatcactgttcctggt
ggttctgatgggccaagcggagttctgatctgctctgaaaactacatcacatataagaat
tttggagaccagcctgacattcgctgtcctatcccacgtcgcaggaatgacctggacgac
ccagaacgtggtatgatatttgtttgctcagcaactcacaagaccaagtccatgttcttc
ttcctagctcagaccgagcagggagacatctttaaggttactttggaaactgatgaagaa
atggtcacagaaatcagactgaagtattttgacacaatcccagtggcaacagccatgtgc
gtgttgaagactggcttcctgtttgtggcttcagaatttggaaatcattacctttaccag
attgctcacttgggcgacgacgacgaagagcctgagttctcctctgcaatgcctctggaa
gaaggggacacgttcttcttccagccccgccccctcaaaaatctggtgctggttgatgaa
caggagaacctgtcacccatcatgttctgtcagattgctgatttggccaatgaagacaca
ccacaactttatgtggcctgtggacgaggacccaaatctacattaagggttcttagacac
ggactggaggtatctgagatggctgtgtctgagcttcctggtaaccccaatgctgtgtgg
acagtacgcagacatattgacgatgaatttgatgcctacatcatcgtgtctttcgtcaac
gctacgctggttctgtccattggggagactgtagaggaggtgactgattctggattcctg
ggaacaacgcccaccctctcctgctcgctgctgggtgaagatgccctagttcaggtgtac
ccagacgggatccggcatattagagcggacaagcgtgtgaatgagtggaagactcctggg
aagaagaccattgtccgttgtgctgtgaatcagcggcaagtggttatcgctctcacaggt
ggtgagctggtctacttcgagatggacccgtcaggccagctaaatgaatataccgagcgc
aaggagatgtccgctgatgtagtctgcatgagtttggccaatgttcctcccggtgaacag
cgctctcggttcctggctgtgggacttgttgacaacactgttcgaatcatatccctcgac
ccttcggattgcttgcagccactgagtatgcaggctctcccagcccagccagaaagtctt
tgtattgttgaaatgggaggggttgagaaacaggatgaacttggagagaaaggaaccatc
ggcttcctctaccttaacatagggcttcagaatggtgtactgctgaggactgtgctggat
ccagtcaccggtgatctatccgataccagaacccgctacctgggctcacgacctgtcaaa
cttttcagagtcaagatgcaaggacaggacgctgttcttgccatgtccagtcgctcgtgg
ctcagctactcatatcagtctcgtttccatttgacgcctctgtcatatgagactctggag
tatgcctcaggctttgcctctgagcaatgcccagaaggcatagtggccatctccaccaac
acacttagaatcttggctttggagaaactaggagctgtcttcaaccaggtggcttttccc
ctgcagtacactcccaggaagtttgtgatccatccagagaccaacaacctaattttgatt
gagactgaccataatgcctacactgaggcgaccaaagctcaaaggaaacaacagatggct
gaggaaatggtggaggctgcaggtgaggatgaacgagaactggctgctgagatggcagcc
gccttcctcaatgagaatcttccagaagccatttttggctcaccaaaagctggcgctggc
cagtgggcttctctggtgcggctggtcaaccccattcagggtgcaacactggaccaggtg
cagttagagcagaatgaagctgcattcagtgttgcagtgtgtcgtttccacaatgcaggg
gatgactggtacgtcctggtgggagtggccagagacatgatcctcaaccctagatcagtt
gggggtggcttcatctacacttaccgcctcattggtggcggggaaaagctggagtttgtg
cacaagacaccagtagaggatgtgcccttggccatcgctccattccaggggcgggccttg
gtgggagtcggaaaactcctgagaatttatgacatgggcaaaaagaaactgctgcgcaag
tgtgagaacaagcatgttcccaatctggtgactggcatccacaccattggccagcgtgtg
gtcgtctctgacgtacaggagagtctcttctgggtccgctacaggcgtaacgagaaccag
ctcatcatcttcgctgacgatacttgtccccgctgggtgacaacagcatgcctgctggac
tatgacaccatggcctccgcggacaagtttgggaacattaccattgtgcgtcttcctccc
aacactagtgatgatgtggatgaggatccaacaggcaacaaggccttatgggacagaggg
cttctcaatggctcatcacagaaggctgacgtggtcgtcaactaccacgtgggggagacc
atcttgtccctgcagaaaaccacactgatccccggaggttcagagtcactggtctacacc
accctgtccggaggcatcggaattctggtcccctttacttcacatgaggaccatgatttc
ttccaacatttagagatgcacatgcgctcagagttcccgccactgtgtggaagagaccat
ctcagctttaggtcctactacttccccgtcaagaatgtgattgacggcgacctgtgcgag
cagttcaacagcatggagcctcacaaacagaaaagtgtggcagaggagctggacaggaca
ccacctgaggtctccaagaaactggaggacatccgcacacgttacgcattctaa
DBGET
integrated database retrieval system
