Phyllopteryx taeniolatus (common seadragon): 133479746
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Entry
133479746 CDS
T09737
Symbol
prdm1a
Name
(RefSeq) PR domain zinc finger protein 1a
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptao03000
]
133479746 (prdm1a)
Transcription factors [BR:
ptao03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133479746 (prdm1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
B129_C2H2-zf
zf-C2HE
STL11_N
Motif
Other DBs
NCBI-GeneID:
133479746
NCBI-ProteinID:
XP_061633076
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Position
6:21577736..21590220
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AA seq
749 aa
AA seq
DB search
MCGWDQSYTATSQSSAMLTSEGAHTMEQDASHHAAKMASISSDGVRTDSDVDMDSMEAAD
EADMTRWTEAEFEEKCTYIVKDSTWEAGPEGDANANAANTGCIRAHASLPRNLMFKHTAD
GKEVVGVCSREYIPKGTRFGPLVGQIYTANSVPKDANRKYFWRIYADGDFHHFVDGLDES
RSNWMRYVNPAHSVAEQNVAACQNGLDVYFYTARPVPAGAELLVWYCHDYARRLHYPPSG
DLMMQKLKRSLLEVKQHQASDPSPPTSATPRAPKREHSVLSILRDVPKSEPSRPLPTRSR
FAYSPERPLYPRALYPPLRGHPEEFLKAGALGYPRSPGDQSSATPSSSARSSPESSPQGS
PSVPFYPGGLGPYPSYSPPSAAPLSSFYPPGAPYSRYLLPHHYALPGGGVPTVGGIYPRM
YPLYLPPHVPLLPSDAAGRRFLMSDATHPSRDFLLPAPTSAFSAAASLKDKVTAHRPYAG
HHSPSSGSPAPGVPGERVPTKLCDSDEEAVNLVKVKRGVGSAGYKALPYPLKKHNGKIKY
ECNVCTKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQV
CHKRFSSTSNLKTHLRLHSGEKPYHCKLCPAKFTQFVHLKLHKRLHSRERPHKCSQCHRH
YIHLCSLRLHLKGYCPAAAPHHIAADEVQRANEEIERFDMSEHAEQLERLQGGAELDAVL
EKQVLGAGWRQSSVIKVRRGLAVKQEADV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggatgggaccaaagctacacggcgacctctcaaagctcggccatgttgaccagt
gagggggcgcacaccatggagcaggacgcctcccaccatgccgccaagatggcctccatc
agctcagacggcgtccggacggactcggacgtggacatggactcgatggaggcagcggat
gaggccgacatgactcgctggaccgaggccgagtttgaggagaagtgcacgtacattgtc
aaggatagcacatgggaggccggaccggagggggatgctaacgctaacgctgctaacacc
ggctgcatcagggcacacgcctcactgccccgaaacctcatgttcaaacacacagctgat
ggaaaagaggttgtgggcgtatgcagccgggagtacatccccaagggtacccgcttcgga
cccctggttggccaaatctacacggccaacagcgtgcccaaagacgccaaccgcaagtac
ttctggcggatctacgccgatggcgacttccaccattttgtggacggtctggacgaatct
cgctccaactggatgcgctacgttaacccagcccactcggtggccgagcagaacgtggcg
gcgtgccagaacggcttggacgtttacttctacaccgccaggcccgtgccggccggggcc
gagctcctggtgtggtactgccatgactacgcacgcagactacactacccgccatcaggg
gacctcatgatgcagaagctcaaacggtccctgctggaggtgaagcagcatcaggcgtcc
gacccatcgccgcccacctccgccacccctcgggcccccaagcgggagcacagtgtacta
tccatcctgcgggatgtccccaagagcgagcctagccgccctctgcccactcgctcgcgg
ttcgcctacagccccgagcgccccttgtacccacgtgccctctacccgccccttagggga
caccccgaggagttcctaaaagcgggtgccctgggttacccccgttcccctggcgaccag
tcgtcggccacgcccagctcatcggcgaggagcagcccggagagcagcccccagggaagc
ccgtccgtgcctttctacccgggcggactggggccataccccagctactctccgccgtcc
gccgccccgctgtcgtccttctacccaccaggggcgccctactctcgctacctcctgccg
catcactatgcgcttcctgggggcggtgtccccaccgtggggggaatctaccccaggatg
tacccgctttacctgcccccccacgtgccactcctaccctcagacgcggcagggcggcgt
ttcctgatgtcagacgccacccatccatcccgggacttcctcctaccggcgcccactagc
gccttctcggcagccgcctccctcaaggacaaggtgaccgcgcaccgcccttacgccggg
caccactccccgtctagcggatcccccgctccgggggttcccggtgagcgggtgcccacc
aagctgtgcgactcggacgaagaggcggtgaacctggtgaaggtgaagcggggtgttggc
tctgccgggtacaaagcgctgccctacccgctcaagaagcacaatgggaaaatcaagtat
gagtgcaatgtgtgcaccaagactttcggacagctttccaatctcaaggtccacctccgt
gtccacagcggcgagcgaccgttcaagtgtcagacgtgcaacaagggcttcacacagctc
gcccacctgcagaaacactaccttgtccatacgggagagaaaccgcacgagtgccaggtg
tgccacaagcgcttcagcagcaccagcaacctgaagacccacctgcgcctccactcgggg
gagaagccgtaccactgcaagctgtgcccggccaagttcacgcagtttgtacacctcaag
ctccataagcgcctgcactcccgcgagcgcccccacaagtgctcgcagtgccatcgccac
tacatccacctgtgcagcctacggcttcacctcaagggctactgcccggccgctgctccc
caccacatcgccgccgatgaagtccaacgcgccaacgaggaaatcgaacgcttcgacatg
agtgagcatgctgagcaactggagaggctccaaggcggagccgagttggacgccgtctta
gagaagcaggttctgggggccgggtggcgccagtcttcggtcatcaaggtgcggcgcgga
cttgccgtcaaacaggaggcagatgtgtga
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