Phyllopteryx taeniolatus (common seadragon): 133480837
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Entry
133480837 CDS
T09737
Symbol
ptbp1b
Name
(RefSeq) polypyrimidine tract-binding protein 1b isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133480837 (ptbp1b)
03041 Spliceosome [BR:
ptao03041
]
133480837 (ptbp1b)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133480837 (ptbp1b)
Spliceosome [BR:
ptao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133480837 (ptbp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133480837
NCBI-ProteinID:
XP_061635466
LinkDB
All DBs
Position
7:5078947..5096070
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AA seq
511 aa
AA seq
DB search
MTTTVGNGNDNKQFKGDPRGLGIPSRVVHIRKLPDDIVEAEVIGLGVPFGDITNLLMLKA
KNQAFLEMSSVECAHNMVSCYSAVLPFIRNHPVFVQFSNHKELKTDHSPNHEVTPPLRTV
KVAKAIAFDQVPAPLSQRAQAALLGAPHMDPSVLPPGGVLRVVVDNMMYPVSLDALCQIF
SKFGTVLRIIIFTKNSQFQALLQYPDSSTAHAAKMCLDGQNIYNGCCTLRINYSKLSSLN
VKFNNDKSRDFTRPHLPGGDIDHSRMAAATFAPGIVSVTPYSAPPRAFPPAFTIQPAGLT
FPGTARPPYAPPPGGRSVLLVGNLHPERVTPQCLFILFGVYGDVMRVKILFNRKDNALVQ
MADATQAQLAMCHLSGQRLHGKPLRVTPSKHASVCLPRDGHECEGLTRDFSCSPLHRFKK
PASKNYANIFPPSATLHLSNIPPSVLEDDLTAIFSSAGARVLDFKFFQKDHKMALIQMGS
VEEATESLILFHNHDLGDRHHLRVSFSKSAI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccacagtaggcaatggcaacgataacaagcagttcaaaggtgaccccaggggt
ctcgggataccatccagggtggtccacatccgcaaacttcccgatgacatcgtggaagcg
gaggtcatcggcctcggcgttcccttcggagacatcaccaacctcctcatgctcaaagcc
aagaaccaggccttcttggagatgtcgtctgtggagtgcgctcacaacatggtgtcttgc
tactcagctgtgctgcctttcatccgcaaccatcccgtctttgtgcagttctccaaccac
aaggaactcaagacggatcactcccccaaccacgaggtaacaccgccgctaagaactgtt
aaagttgctaaagcgatagcgtttgaccaagtccccgctcccctgtctcagagggctcaa
gcggctctgcttggagctccccacatggacccgtctgtgctgccccccggtggtgtgctg
cgtgtggtggtggacaacatgatgtatcctgtcagtctggatgctctctgtcagatcttc
tccaaattcggcacagtgttgaggatcatcatctttacgaagaacagtcagttccaggct
cttcttcagtaccccgacagctcaaccgcgcacgctgctaaaatgtgtctggatggtcag
aacatctacaacggctgctgcacgctgaggatcaactactccaagctgagcagcctgaac
gtcaagttcaacaacgacaagagtcgagacttcaccagaccgcacctccccggcggagac
atagaccattcccgcatggccgccgccaccttcgctccgggcatcgtgtcggtcacgccc
tactccgccccgccacgcgccttcccccctgccttcactatccagcctgcagggctgacg
ttccccgggaccgccaggccgccctacgccccgccgcccggcgggcgctccgtcctgctg
gtcggcaacctccacccagagagggtgacgccccagtgcctctttattctctttggcgtg
tacggcgacgtgatgcgtgtgaagatcctcttcaacaggaaggataacgcgctggtgcaa
atggccgacgccacgcaggcgcagctcgccatgtgccacctgagcgggcaacgcctgcac
ggcaagcccctgcgcgtgacaccatccaaacacgccagcgtgtgtttgcctcgcgatggg
cacgagtgtgaaggtctgactcgagactttagctgctcaccgctgcaccgtttcaagaag
cccgcctccaagaactacgccaacatcttcccgccctccgctacgctgcacctgtccaac
atcccgccctcggtgctggaggacgacctgacggccatcttctccagcgccggcgctcgt
gtgctcgacttcaagttctttcagaaggaccacaagatggcgctgatccagatgggctca
gtggaggaggccacggagtcgctgatcctgttccacaatcacgacctcggcgaccgtcac
caccttcgggtgtccttctccaagtcggcaatctga
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