Phyllopteryx taeniolatus (common seadragon): 133481167
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Entry
133481167 CDS
T09737
Symbol
smx5
Name
(RefSeq) smx5
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03018
RNA degradation
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133481167 (smx5)
09123 Folding, sorting and degradation
03018 RNA degradation
133481167 (smx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133481167 (smx5)
03041 Spliceosome [BR:
ptao03041
]
133481167 (smx5)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133481167 (smx5)
mRNA degradation factors
5'-3' decay
Lsm complex
133481167 (smx5)
Spliceosome [BR:
ptao03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
133481167 (smx5)
Complex C
U2 snRNP components
133481167 (smx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
133481167
NCBI-ProteinID:
XP_061636225
LinkDB
All DBs
Position
7:5583358..5585487
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctattcgtttttcaagtctctggtgggtaaagacgtggtagtggagctaaaa
aacgacctgagcatatgtggaactcttcattcagttgaccagtacctcaacatcaaactg
acagacatcagcgtcaccgatccggagaaatacccgcacatgttgtcggtgaaaaactgc
ttcatccgcggctcggtggtgcgctacgtgcagctgcccgccgacgaggtggacacgcag
ctgcttcaagacgccgcacgcaaagaagccatgcagcagaagcagtga
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