Phyllopteryx taeniolatus (common seadragon): 133481294
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Entry
133481294 CDS
T09737
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03030
DNA replication
ptao03410
Base excision repair
ptao03420
Nucleotide excision repair
ptao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133481294 (rfc4)
03410 Base excision repair
133481294 (rfc4)
03420 Nucleotide excision repair
133481294 (rfc4)
03430 Mismatch repair
133481294 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptao03032
]
133481294 (rfc4)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133481294 (rfc4)
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133481294 (rfc4)
DNA replication proteins [BR:
ptao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133481294 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
133481294 (rfc4)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133481294 (rfc4)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133481294 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
133481294 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_30
AAA_22
AAA_11
AAA_assoc_2
AAA_16
Mg_chelatase
AAA_19
AAA_24
AAA_14
ResIII
DUF815
RuvB_N
RPA_interact_N
AAA_7
Gp44_lid
AAA_5
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
133481294
NCBI-ProteinID:
XP_061636474
LinkDB
All DBs
Position
7:complement(2012482..2046237)
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATVQTSRPQKDKCASGSSIKKAKLTPWVEKYRPKCIDEVAFQEEAVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAAARGLYGPELYKQRVLELNASDERGIQVIREKVKNF
AQLTVAGTLPDGKPCPPFKLIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLADQVQEDRLLEICGKEKLKYTKESILALVKVSEGDLRKAITFLQ
SAARLNVNNEITELAVIEIAGVVPTKMIDDLLQVCFKGSFEKLEFAVRSMVDEGYAATQI
LSQLHDYIIEQDLSDKHKSLIAEKMAVVDKCLSDGADEYLQLLSLCSSILPQAPQNN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttttgaaaggagcaacagttcaaacaagtcgacctcagaaagacaagtgt
gcttcaggttccagcataaagaaagccaagcttactccatgggttgaaaaatatagacca
aagtgcattgacgaagtcgcctttcaggaagaagctgtagcagtgttgaagaagtcactg
gaaggagcagatcttccaaacttgctcttctatgggccacctggtacaggaaagacctct
accatattagctgctgcgagaggactttatggtccagaactgtacaagcagagggtgctt
gagctcaatgcctcagatgaaaggggcattcaggtcatcagggaaaaggtcaaaaacttt
gctcagctcactgtagcagggactctgccagatgggaagccatgtcctccttttaagctc
atcatcctggatgaagctgactccatgactgcacccgctcaggctgcgctcaggaggaca
atggagaaggagtcccgcaccacacgtttctgtcttatttgtaactacatcagtaggatc
attgagcccttgacttccagatgttccaagtttcgttttaaaccacttgctgaccaggtc
caagaagaccgtttgttagagatctgtgggaaggagaaactcaagtacacaaaagagagt
atattagcactagtgaaggtgtcagagggagatctgcggaaagccatcaccttcctccag
agtgccgcccgcctcaatgtcaacaatgagatcacagaacttgctgtcatcgaaatagcg
ggggttgttcctaccaagatgatcgatgatttgcttcaggtctgctttaaaggaagtttt
gagaaactagagtttgcagtcaggagtatggtggatgaaggctacgctgccacacagatc
ctgagccaacttcatgactacatcattgaacaggacttgagtgataagcacaagtctctc
attgctgaaaaaatggcggtggtggacaaatgcctgtctgatggtgcagatgaatacctg
cagctgctgagtctatgttcatcaatcctgccgcaagcaccccagaacaactga
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