Phyllopteryx taeniolatus (common seadragon): 133482001
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Entry
133482001 CDS
T09737
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao04382
Cornified envelope formation
ptao04510
Focal adhesion
ptao04512
ECM-receptor interaction
ptao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133482001 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133482001 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133482001 (col4a4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133482001 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptao04147
]
133482001 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
ptao00536
]
133482001 (col4a4)
Exosome [BR:
ptao04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133482001 (col4a4)
Glycosaminoglycan binding proteins [BR:
ptao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133482001 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133482001
NCBI-ProteinID:
XP_061637465
LinkDB
All DBs
Position
8:27569492..27599570
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AA seq
1650 aa
AA seq
DB search
MRLRCFLMLLTSTAVLGGDDAVLCGGRDCSSCQCFPAKGARGSPGSLGRQGPVGPPGFPG
PQGPPGEKGKRGAEGPAGSPGPKGDMGAVGVPGFPGLEGVPGHTGPAGGPGFPGVDGCNG
TRGKQGDPGLPGEQGPSGDMGLQGPKGFPGEPAFFFLQYPGVPGDAGFRGLPGLPGGQGP
GGSTGLMGPVGPDGVNGLPGLPGFRGLPGERGRSVPGPKGDEGEQGIQGRPGPFEIVDPP
EEFFVKGEQGPAGPKGVCGDQGLPGLDALPGIKGEKGIVGPPGPRGLLGRRGRPACKGAK
GAVGTSGLPGLIGQEGPKGMMGDLGLKGLPQEIVITHSGDAGNPGSPGLMGPPGDRGLMG
MHGPQGAPGRAIPGPAGVVGARGTPGSRGEKGDPGQVFTDQAFSGEAGRPGSPGPRGAKG
QPGRPGYYCLPGLPGESGEPGEQGLSGAPGYYGFKGRQGECSCGPLIVVRGPSGPAGEPG
LVGYQGSPGAQGPRGEKGLAGDTGAKGQAGLDGLPGLKGFKGQKGDFVVVDIKGEKGKSA
EPGFAGRQGFPGRRGQNGIPGLPGSPGPQGENYPGSSGDQGLPGLPGPKGLTGLTGPQGL
GVVGAIGRRGDPGAPGPVGFPGLPGLKGVQGETLTCVPRNPGALGQKGEAGDRGLRGLPG
PPGFSGFTGPDGPNGEKGQSGLPGPRGVAGPPGFIGDTGDEGLEGFSFAGGPGSPGAPGT
PGLRGPAGESYVGTSGPIGFPGLAGSQGPKGVPGQAGKQGFQGVPGLPGSPGARGQRGQD
GAMGTIGPPGPIYDFCERGKPGPTGSRGPQGAIGPQGCFGQKGEVGEIRSPRYGPRGPAG
KPGSSGFPGYPGLPGPPGPSGDSGFSGWDGPKGLRGPLGKNGVQGVQGSIGFPGYPGRTG
ERGSNGQDGRPGFQGPKGERGCKGNPGPPGETLGVPIQGVRGKPAPPGVNGFPGARGNKG
AQGLVGKPGYPGTDMPPGISGPPGPPGSSYKPGFSGGLGPPGPSGFLGFPGETGDPGDQG
SPGSSGERGRQGRPGSKGDQGESRSRPGLPGDKGLPGYSGPPGPPGPQGDPGALGFTGEP
GQRGSKGDPGQPGEQGSSGVTGPPGPRGRPGVPGLPGNTGADGPPGAQGLSGLQGPPGPL
GLHGLDGLKGVKGDIGSRGLSVIGSQGSQGLPGEKGPPGPRGPPGSSQPGPPGPRGPPGS
RGPQGRVGPSGESGPDCKSPPLGILGDPGDPGLDGEPGYPGDMGESGLNPPVAGDDGDNG
DNGCLGPKGDKGIPGPTGQPGIGGFPGFKGEQGSPGLMGIPGNTGPRGFPGPTGPLGSQG
STGLAGPKGEMGRVFPCPTYPSPPPGPPGPPGLPGVAGSAGFQGENGFQGLKGKKGDAGC
LGPQGPRGSPGPDGEPGRRGLEGENGVVGAKGDPGLIGDRGPPGPSRPLNAGFLMVMHSQ
SKALPSCPQGMRILWVGYSLLYLEGQEKAHTQDLGQAGSCMRVFSTMPFASCNMGTCSYA
GRNDKSYWLSTTAAVPALPVGGASVEEHISRCAVCEAPSAPVALHSQSCVQPRCPPNWTS
LWTGYSFLMHTGAGDEGGGQSLTSSGSCLLNFRAQPFVECQGPRGTCHYFANIYSFWLTT
PASGAVTTEADAQHGSNVGRCTVCIKVGRP
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaggtgcttcctgatgctcctgaccagcaccgctgttcttgggggcgacgac
gcggtgctgtgtggtgggcgagactgttcctcctgtcaatgctttccagcgaagggggcg
agggggtccccagggtctcttgggcgtcagggtcctgtggggccccccggcttcccaggc
ccgcagggtcctccaggagagaaaggcaagcgaggggctgaaggcccagcaggatctccg
ggaccaaagggagacatgggagctgttggtgttcccggatttcctggtttagagggagtc
ccgggtcacacaggcccagccggtggtcctggttttccaggtgtggacggctgtaacggg
accagaggaaagcagggagatccaggactacctggagaacaagggcccagcggtgacatg
ggtcttcaaggaccaaagggatttccaggagagccagcattcttctttctccagtaccct
ggagtccccggtgacgccggcttcaggggacttcctggtctgccgggtggacagggtcca
ggaggttcgacaggattaatgggtcccgtcggtcctgacggagtaaatggtctccctggt
ttgccaggtttcagaggtctacctggtgaacgaggtcgatcggtgccgggaccgaaagga
gacgagggggaacaaggcatccaggggcgcccggggccatttgagattgtcgatcccccg
gaggaatttttcgtcaaaggagagcagggtccagcagggccaaaaggggtgtgtggagat
caaggcctaccaggtctggatgctcttcctggcatcaagggagagaaggggattgtggga
cctcctggacccaggggactcctaggacgccgtggtcgacccgcttgcaaaggagcaaag
ggcgctgtaggaacttctggtcttccaggtctgatcggacaagaaggtccaaagggcatg
atgggagatcttggtctaaaaggcctgcctcaggaaatcgtcatcacacattcgggtgac
gctggaaatccaggaagtccgggattgatgggacctccaggagatcgtggactcatggga
atgcacgggccccaaggagcccctggtagagctatcccaggaccagcaggagtggtggga
gcgagggggactccgggaagcagaggtgagaaaggtgatccgggtcaagtttttacagat
caagcattctcgggagaagcaggaagacctggaagtccgggacccagaggagcaaaagga
caaccgggaaggccaggctattactgccttcctggcctaccaggagaatctggagaacct
ggtgaacaagggctctcaggggccccaggttactacggattcaaaggtcgccaaggtgaa
tgctcctgcggtcctctgattgtggtgaggggaccctcaggcccagcgggggagcccggg
ttggtgggctatcaagggtcccctggagctcaggggccaagaggggagaaaggcttagcg
ggagacactggagctaaaggacaagcgggcctggatgggttacctggcctcaaagggttc
aaaggtcaaaaaggagacttcgttgtggtagacattaaaggtgagaagggcaaaagcgct
gagccgggttttgcgggtagacagggtttccctgggagaagaggacagaatggaatccca
ggactccccggaagtcctggacctcagggagaaaattaccccgggtcttcaggggaccaa
ggccttccaggtctccctggtcccaaaggactaacgggacttactggcccccagggatta
ggtgtggttggagcaataggaaggcggggagacccaggggccccgggacctgtgggtttc
cctggcctccctggcttgaaaggtgttcaaggcgaaacgcttacttgtgtacccagaaac
cctggagctctaggacagaaaggggaggccggagatagaggcctcagaggacttcccggt
cctcctggtttcagtggattcacaggacctgatggacctaacggagaaaaaggacagtct
ggacttcctggaccacgtggagtagcaggaccgccaggtttcattggagatactggagat
gaaggacttgaaggattcagttttgctggaggaccaggctctccaggtgcaccaggcact
cctggacttagaggaccagctggagagtcttatgtggggacctcaggacccattggcttt
ccaggactagcaggctctcagggacctaaaggagtcccaggccaagctggcaagcagggt
ttccaaggagttccaggtctgcccgggagtccaggggcacggggtcagagaggacaggat
ggcgctatgggaactattggtcccccgggcccgatctatgatttttgcgaaagaggaaaa
cctggtcccacaggctctcgcggtcctcagggagcaattggcccccagggatgttttggg
cagaaaggtgaagtgggagaaataagatctccacgttatggcccccgtggccctgcaggt
aaaccagggtcttctggttttcctggttatcccggacttccgggcccacctggtcccagt
ggagactctggattttcagggtgggacggcccgaaaggtctgaggggaccccttggtaag
aatggtgtccaaggggtacaaggatcaattgggttcccaggatatccagggaggacagga
gagagaggatctaatgggcaagacggcaggccaggatttcaaggtcccaaaggagagaga
gggtgtaaagggaacccaggacctcctggggagacactgggtgtccccatccaaggtgtg
agaggaaaaccggccccccccggtgtcaacgggttccccggtgcacgaggaaataagggt
gcacaaggtcttgtgggcaagcctgggtatccaggcaccgatatgcccccgggcatcagt
gggcccccgggtccgcctgggtcttcgtacaaaccaggtttttctggaggacttgggcct
cctggaccttcaggtttcctcggcttccctggagaaacaggagacccaggtgaccaaggt
tcccctgggagctctggtgaacgcggtcgtcaaggacgtcctgggtccaaaggtgatcaa
ggagagtctcgcagtcgacctggtttacctggggacaaggggcttcccggatactctgga
cctccaggtcctcctggacctcaaggagatcctggagcactgggtttcactggagaacca
ggccagagaggctccaaaggagatccgggacagcccggggagcagggatcatcaggtgtg
actgggcccccaggacccagaggtcgcccaggggttcctgggcttcctggtaatacgggt
gctgacggtccccctggagcgcagggtctctcaggactacaaggtcctcctggaccactg
ggacttcatggcctggatggactgaagggagtgaaaggagacattggcagcagaggtctc
agtgtcataggttctcaaggctctcaaggccttccaggagaaaaaggcccgcctggtcct
cgaggtcctccaggttcatcacagccaggacctccaggacccagaggccctccaggatcc
agagggccacaaggacgagttggtccttcaggtgaatctggacctgactgtaaaagtcct
cccctagggattttgggagatcctggtgaccctggactagacggagagccaggttacccc
ggtgacatgggggagtctggtcttaaccctccagtagctggcgatgatggggacaatggg
gacaatggatgcctaggcccaaagggagacaaaggaattccagggcccacaggacaacca
ggcataggtggatttccagggttcaaaggtgagcaaggttctcctggcctgatggggata
cctggaaacacaggccctagaggttttccaggaccaactggaccacttgggtctcaaggc
agtacaggtctggcaggtccaaagggggagatgggcagagtttttccttgccccacttac
ccttcacccccaccgggccctccaggaccccctgggctacctggtgtagcaggaagtgct
ggttttcagggagagaatggtttccagggactcaaaggtaagaagggggatgccgggtgt
ctgggaccacaaggccctcgggggtcaccgggtcctgacggggagccaggtcgacgaggc
ctggagggggagaacggtgtggtgggagccaagggtgatcctggtttgattggggaccgt
ggacctcctggaccgtccagacccttgaacgcgggcttcctgatggtcatgcacagccag
tccaaagcgctcccatcgtgtccacaggggatgcgaattctgtgggtgggatacagtctg
ttgtacctggaaggccaggagaaggcgcacactcaggaccttggccaggcgggctcgtgc
atgcgcgtcttctccaccatgccgttcgcttcgtgcaacatgggcacgtgctcctacgcc
ggccgcaacgacaaatcctattggctgtccaccacggccgccgtgcccgccctgccggtg
ggcggagcctccgtcgaagagcacatcagccgctgcgcggtgtgcgaggcgccctcggcc
cccgtggctctgcacagccagtcgtgcgtccagccccggtgcccgcccaactggaccagc
ctgtggaccggctactccttcctcatgcatacgggcgcgggcgacgagggcggcggtcaa
tctctgacgtcgtcgggaagttgcctgctgaacttccgggctcagccttttgtggagtgc
caaggccctcgcgggacgtgccactacttcgccaacatctacagcttctggctgaccacg
ccggcgtcgggcgccgtcaccacggaggccgacgcgcagcacgggagcaacgtcggacgc
tgcaccgtctgcatcaaagtcggccggccgtga
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