Phyllopteryx taeniolatus (common seadragon): 133482200
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Entry
133482200 CDS
T09737
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03440
Homologous recombination
ptao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133482200 (brip1)
03460 Fanconi anemia pathway
133482200 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133482200 (brip1)
Enzymes [BR:
ptao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133482200 (brip1)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
133482200 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
133482200 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
133482200
NCBI-ProteinID:
XP_061638030
LinkDB
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Position
8:25054055..25171176
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AA seq
1144 aa
AA seq
DB search
MRHPTEIGSTFYSCKHSFAKNKIIFFPDNGVLSSRTKMILRGLNYGQHCLLESPTGSGKS
LALLCSALGWQQAQFDKMQREESSGDESHSCKISDVTKSNVTIPCQCLCHSKVRCASNAT
LTKAPVVDLTMSPTKEMSEQLHTGYQTTKSVPGKRLLSELGDTIQLSNNTDHDKADFQPE
RKLIRTAETKGVVFSEDVPELENHPTCPQSSIMESKVHGAGLLSSCISPESCIQCPCASA
KDTVKDKDAKRKIPKIYFGTRTHKQITQIVHEMKRTAYSTAPMTILSSRDHTCINPDVAP
HSNRNELCKDLLTAKDARSCRYFHAVQKMANHNTLQLIHGMCQAWDIEDLVSLGKRLRSC
SYYAARELMQGSYIIFCPYNYLLDPVIRESMEIDLAGHILVLDEAHNIEDCARESASFIL
DHNSLLMCRDELDGMVNNNIRRLKHEPLRDFCYCLANWIQESQSLMSDRGYEEACKIWSG
KEILSIFDTLGITSDSFQMLKQNMAAVLAKEEIARVLNGKEEIMQVPTISSSTSSILKGL
FMVLDFLYRDNCRYSEDYRVALRKTYSWMSKAPDSMRDTQGFMAKPGHRQHQRIRVKTGF
LTLSFWCLNPAVAFSDLSGTVHSIVLTSGTLSPMGSFSSELGVKFSLQLEASHVINKSQV
WVGTLGVGPQGRKLCATFQYAETYAFQDEVGDLILHVCQVVPKGVLCFLPSYKMLDKLRD
RWNITGVWEKLEKQKKVITEPRGGGKGDFDGLLQAYYNAIKSCEKRDGALLMAVCRGKVS
EGLDFTDDNARAVITIGIPFPNIKDLQVELKMKYNDQHSKSRGLLPGHRWYEIQAYRALN
QALGRCIRHRNDWGALILVDDRYRSNPNKYIKDLSKWVRQLVQHHDTFTSAMQSIVAFSQ
TLQKCHLLTKSQNSTVSFPSSVSVTKALQDLPKPVDFYLSSHTPVKAEHHELQDWQRMTH
IPHSEPSFHPPANSLNLILTSEKQPILSLQNKNKNSVFESSAATGSSEFKRGGYIPHLEP
STTRRTHLNTDCELPPTDNRNEKEEDQTVFYTPELFNAKAGACEGTAKTSPSLVILGTES
QALHPQNNLGSELAPDSEKRMVSFNTENIPLSGREETKVGAEQVRNKIRLSRSRQRAHLS
PTDN
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacccaacagaaattggatcaacattctacagttgcaagcactcatttgccaaa
aataaaatcatttttttccctgacaatggtgtgctgtcatcaaggactaaaatgatccta
cgagggttgaactatgggcagcattgtttgctggaaagtcctactggaagtggcaagagt
ttagccttgctgtgttcagcactgggatggcagcaggcacagtttgataaaatgcaaaga
gaagaaagctctggagatgagagccactcttgtaaaatctctgatgttacaaagtcaaat
gtgaccattccatgccagtgtctgtgccatagcaaagtcagatgtgcctcaaatgccaca
ttgaccaaagctcctgttgttgaccttacaatgtcacccactaaagagatgtcagaacag
ctgcataccggatatcagactaccaagtcagttcctggaaaaaggttactctctgaactg
ggtgacacaatccagctttccaacaacactgaccatgacaaagcagatttccagcctgag
aggaaactcattcgcactgctgaaaccaagggagttgtattttcagaagacgtgccagag
ctggaaaatcaccctacatgccctcagagttcaattatggagtcaaaagtccatggtgct
ggattattgtcctcgtgcatttcccctgaatcatgcatccagtgcccatgtgcatcagcc
aaggacactgtgaaggataaagatgccaaaaggaagatccccaagatttactttggcaca
cgcacacacaaacaaataactcaaattgttcatgagatgaagcgtactgcatactccact
gctccaatgaccatattatccagcagagatcatacctgtatcaacccagatgtggcgcct
cactccaaccggaatgaactctgcaaggatctactcacggccaaagatgcaagatcatgc
cgttacttccatgcagtacaaaaaatggccaaccacaacactctgcagttgatccatgga
atgtgccaagcttgggacattgaggacctggtttcattgggcaaacggcttcgctcatgt
tcatactatgctgctcgtgaactcatgcaaggctcctacatcatcttctgtccatataac
tacctgttagatccagtgatcagagagagtatggagattgatcttgcaggccacatcttg
gtgctggatgaagcccataatattgaagactgtgctagagaaagtgccagcttcatttta
gaccacaatagtttgctgatgtgcagggacgagttggacggcatggtcaacaacaacata
cggcggttgaaacatgagcctctgagggatttttgctattgtctagccaactggatccag
gaaagccaaagcctgatgtctgataggggatatgaagaggcatgtaaaatttggagtgga
aaggaaatactgagtatttttgacaccctgggtattacttctgacagcttccagatgctg
aagcagaatatggctgcagtgctagcaaaggaggagattgcgagagtactaaatggtaaa
gaagaaattatgcaagtcccaaccatcagctcatcaacatccagtatcctgaaaggcctc
ttcatggttcttgacttcctctacagagacaactgcaggtattccgaagactacagagtt
gcacttcggaagacatattcttggatgagcaaagccccggatagcatgagggatacacag
ggcttcatggccaaaccaggccacagacaacaccaaagaatcagagtaaagactggattt
ctgacattgagtttctggtgcctcaaccctgctgtggccttttctgacttaagtgggaca
gtgcatagcattgttctgacatcagggacactgtcaccgatggggtccttctcctcagaa
cttggggtgaaattttctcttcaactggaggccagtcatgtcatcaacaaatcccaggtt
tgggttggcactcttggtgtaggacctcaaggcagaaagctctgtgccaccttccaatat
gctgaaacatatgccttccaggatgaagttggtgacctgatactgcatgtctgccaagtt
gtgccaaagggtgttctctgcttcttgccttcctacaagatgctggataagctgcgggat
cgatggaacatcactggtgtttgggagaaacttgaaaaacaaaagaaagtgataacagag
cctcgtggtggcggcaagggtgattttgatggactacttcaggcttactacaatgcaatt
aaatcctgtgagaaaagagatggtgctctcctgatggctgtgtgtcggggaaaagtgagc
gaaggactagacttcacagatgacaatgcaagagcagtgatcactattgggatccccttc
ccaaatattaaagacctccaggttgaactcaagatgaagtataatgatcagcactcaaag
agcagaggtcttctccctggccatcgctggtatgagattcaggcttaccgagctctaaac
caggccctgggaaggtgtattcgtcaccgaaatgactggggtgccctaattctagtggat
gatcgttataggagtaatccaaacaagtacatcaaagatctgtccaaatgggttcgccaa
cttgtacagcatcatgacaccttcaccagcgccatgcagtccattgtagcattctctcag
acactacagaagtgtcaccttctgacaaagagccagaactcaaccgtctcctttccaagc
agcgtatctgtaactaaggcgttgcaggatttacccaaaccagtggatttttatctttca
tcccacacaccagtgaaagctgaacatcatgaattacaagattggcagaggatgacacac
attccacattcagagccatctttccatccaccagccaacagtctgaacctcattttgaca
tcagagaaacaaccaatcctctctctgcaaaataagaacaagaactctgtctttgaatca
tcagctgcaacgggatccagtgaattcaaaagggggggatatattccacatttggagcct
tcaacaacacgaagaacccatttgaacacagattgtgaattgcctccaaccgacaatcga
aatgaaaaagaagaggaccagactgtcttttatacccctgaactttttaatgctaaagcc
ggcgcctgtgaaggaactgcgaaaacgtcaccatccctggtcattttgggaacagagagt
caagccctacacccacagaataatttgggatctgagctcgccccagactctgaaaagagg
atggtttcattcaacacggagaatataccgttatcaggcagagaagagacaaaggtggga
gcagagcaggtgagaaacaagatccggctctcaagatccagacagagagctcacctatcg
ccaacagataactaa
DBGET
integrated database retrieval system
