Phyllopteryx taeniolatus (common seadragon): 133482354
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Entry
133482354 CDS
T09737
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133482354 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133482354 (ddx6)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133482354 (ddx6)
Enzymes [BR:
ptao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133482354 (ddx6)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133482354 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
133482354 (ddx6)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Gene silencing
piRNA pathway
133482354 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SNF2-rel_dom
AAA
Motif
Other DBs
NCBI-GeneID:
133482354
NCBI-ProteinID:
XP_061638396
LinkDB
All DBs
Position
8:30647242..30660221
Genome browser
AA seq
481 aa
AA seq
DB search
MSTARTENPVILGLSNQNGQLRGSVKPTGAPGGGGGGLQQQPLNQMKGTINGKPLTAPAT
NSVIKPGDDWKKNLKLPPKDMRMRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPI
QEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKRDYIQALVIVPTRELALQVSQ
ICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVSQVQM
IVLDEADKLLSQDFVVMMEEILGFLSKQRQILLYSATFPLSVQKFMNSHLQKPYEINLME
ELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCF
YIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRI
GRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPGIIDKSLYVAEYHSESGEEVK
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgccaggacggagaacccggtcatcttgggcttgtcgaaccagaatggacaa
cttcggggctcagtgaagccgaccggagcgccgggtggcggcggcggaggcctccagcaa
cagccgctaaatcagatgaaaggcacaattaatggcaaacccctaactgctcctgcgact
aactctgtcatcaagcctggagatgactggaagaaaaatttgaaattgcccccaaaggac
atgaggatgagaacttcggatgtgacggcgacaaaaggcaacgagtttgaagattactgc
ctcaagagggagctgcttatgggcatctttgagatgggctgggaaaagccgtctcccatc
caggaggaaagcattcccatcgcgttgtcggggagggatatcttggccagagccaagaac
ggcacagggaagagtggagcctacctcattcccttacttgaacgcattgacctgaagagg
gactacatacaagcattggtcatagtgcccaccagagaactggctctgcaggtaagccaa
atatgtatccaggtcagcaaacacatggggggcgtgaaggtgatggcaaccacgggtgga
accaacctacgcgatgacatcatgagactggatgaaacggttcatgtggtcattgccact
ccagggaggattttagacctcatcaagaaaggagtggccaaagtcagtcaagtgcagatg
attgttcttgatgaggctgacaaactcctgtctcaggactttgtggtcatgatggaagag
attctgggcttcctctccaaacagagacagattttgctttactctgctacctttccccta
agcgtccagaagtttatgaattcgcacctgcagaagccctatgagatcaacctcatggag
gagctcacattgaagggggtgactcagtattacgcctacgtcaccgaaaggcaaaaagtt
cattgcctcaacaccttgttctccaggctccagatcaaccagtctataatcttctgcaac
tcctctcagagagtggagctccttgccaagaagatctcccagctcggttactcgtgtttc
tacattcatgccaagatgagacaggaacatcgcaaccgtgtgttccatgacttccgaaat
ggtctctgtcgaaatctcgtctgcactgacctcttcacaagaggaatagacattcaagct
gtgaatgttgtaatcaactttgacttcccgaagctgggagagacgtaccttcatcgcatt
ggcagatctggccgatttggacacttgggtctggccatcaacctgatcacatatgatgat
cgcttcaacctgaaaggcattgaagaacagttgggaacagagatcaagcccatccccggc
atcatcgacaagagcttgtatgtggcagagtaccacagtgagagtggcgaagaagttaag
ccatga
DBGET
integrated database retrieval system
