Phyllopteryx taeniolatus (common seadragon): 133482677
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Entry
133482677 CDS
T09737
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03030
DNA replication
ptao03420
Nucleotide excision repair
ptao03430
Mismatch repair
ptao03440
Homologous recombination
ptao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133482677 (rpa1)
03420 Nucleotide excision repair
133482677 (rpa1)
03430 Mismatch repair
133482677 (rpa1)
03440 Homologous recombination
133482677 (rpa1)
03460 Fanconi anemia pathway
133482677 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptao03000
]
133482677 (rpa1)
03032 DNA replication proteins [BR:
ptao03032
]
133482677 (rpa1)
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133482677 (rpa1)
Transcription factors [BR:
ptao03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133482677 (rpa1)
DNA replication proteins [BR:
ptao03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
133482677 (rpa1)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
133482677 (rpa1)
MMR (mismatch excision repair)
133482677 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
133482677 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
OB_MEIOB_N
POT1
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
133482677
NCBI-ProteinID:
XP_061639059
LinkDB
All DBs
Position
8:7929776..7963189
Genome browser
AA seq
611 aa
AA seq
DB search
MITLTEGAIEALSSGNCGNDAVLQLVSIRKIEGGSGPARFRVMMSDGRHTMSSFMLCTQL
NCMAEDNQLAPNCIVLLKRHVTNILKDGRRVVIILEIEVLTPAADINGRIGNPTPYSDGQ
IKPPQQAAPPATPPSRPPLQAQIGNDPPSSTSFLPPVNRVVGKDFGKKPAVLGMPGGPSK
VVPIASLNPYLSKWTIRARITNKSSIRTWSNSRGDGKLFSMEIVDESGEIRVTGFNQEVD
KYFGLIEVGKVYYISKGSLKVANKQYTSVKNDYEITLSGETSIIPCEDNCDLPVVQCNFI
SIGDLEKTANDSIVDVIGVCKSVDEVTRFTSKSNREFSKRTLNLMDTSGKMVTVTLWGDE
AEHFDGTSQPVVAIKGAKVSDFGGRSLSASFSSTLMINPDIPEAYKLRGWYDKEGHGMDG
QSLTELKGGSGGRNTNWKTLSDVKTEHLGHGEKADYYTCIGTIVYLRKENCLYQACPIQD
CNKKVVDQQNGMFRCEKCDKEFPNFKYRLILSANISDYGDNQWVTCFQESAEAILGQNAA
YLGQLKDSDEAAFDEIFQQANFNTFVFRNRVKLETYNDESRIKATVVDVKPVDHKDYSKR
LIMNIRKMATQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgctgacggaaggagcgatagaggccttgtcaagtggaaactgtgggaatgat
gctgtgcttcagttggttagcatccgtaagattgagggtggaagtggtccagctcgcttt
cgtgtaatgatgagcgatggacgacacaccatgtcctccttcatgctttgcacccaactc
aactgcatggccgaagacaaccaactggcccccaactgcatcgttcttctcaagagacac
gtgaccaatattctcaaggatggacggcgtgtggtaatcattttggagattgaggtcctc
acacccgcggcagacatcaatgggcgaattggcaacccaacaccttacagcgatggacag
attaagcctccccagcaggctgccccacccgctacccccccaagccgccctccgttgcag
gctcaaataggaaatgacccgccctcctccacctccttcctccctccagtgaacagagtg
gtcggcaaagatttcgggaagaagcctgctgtgctcgggatgccgggggggccctccaaa
gtcgtgcccattgccagcctgaacccgtacctatcaaaatggaccatccgtgctcgcatc
accaacaagagtagcattcgcacctggagcaactcacgcggcgatggcaaacttttctcc
atggagattgtggatgagagcggagagatcagggtcactggcttcaaccaagaggtggac
aagtatttcgggctcatcgaggttggcaaggtctactacatctctaagggctccctgaaa
gtggccaacaagcagtacacatcggtgaagaatgactacgagatcacactgagtggcgag
acctccatcattccgtgcgaggacaactgcgacctccccgtagtgcaatgcaacttcatt
tcgattggcgacctggagaagacggcgaacgattccattgttgacgtgattggcgtgtgc
aagagtgtggacgaggtaacccgcttcacctctaagagcaaccgggaattctctaagcgg
acgctcaacctgatggacacttccggcaagatggtgacggtcactttgtggggagatgaa
gcggagcatttcgacggcacctctcagcccgtcgtggccattaagggcgccaaggtgtcc
gacttcggcggccgctcactttcggcgtccttcagcagcaccctgatgatcaacccggac
atccctgaggcgtacaagctgcgaggctggtatgacaaggaagggcacggcatggatgga
cagtctctgacggagttgaaaggtggcagcggcgggagaaacaccaactggaagacgctg
tctgatgttaagacggagcacctgggacacggagagaaggccgattactacacctgtatt
ggcaccatcgtgtacctgcgcaaggagaactgcctctaccaggcgtgcccaatccaagac
tgcaacaagaaggtggtggaccagcagaacgggatgttccgctgcgagaagtgcgacaaa
gagttccccaactttaagtaccgcctcattctttctgccaacatttcagattacggtgac
aaccagtgggtgacctgctttcaggagagcgccgaggctattttgggccaaaacgcagct
tacttgggacagctcaaggactcggatgaagctgcctttgacgagatcttccaacaagcc
aactttaacacgtttgtgttccgcaatagagtgaagcttgaaacatataacgacgagtcc
aggatcaaagcaacggtggtggatgtaaagcccgtggaccacaaggattacagcaagagg
ttgatcatgaacatcaggaaaatggctacccagtag
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