Phyllopteryx taeniolatus (common seadragon): 133483674
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Entry
133483674 CDS
T09737
Symbol
col2a1b
Name
(RefSeq) collagen, type II, alpha 1b isoform X1
KO
K19719
collagen type II alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao04510
Focal adhesion
ptao04512
ECM-receptor interaction
ptao04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133483674 (col2a1b)
04518 Integrin signaling
133483674 (col2a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133483674 (col2a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptao00536
]
133483674 (col2a1b)
Glycosaminoglycan binding proteins [BR:
ptao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133483674 (col2a1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
133483674
NCBI-ProteinID:
XP_061641176
LinkDB
All DBs
Position
9:19530511..19590162
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AA seq
1491 aa
AA seq
DB search
MVSFLDSRTLLLLAAAQVCLLAIVRCQDDNQEDALSCLQDGQRFSDKDVWKPEPCRICVC
DTGTVLCDEIVCEELRDCPKPEIPFGECCPICAADPSPPIGTPGAKGQKGEPGDITDVVG
PRGPPGPMGPPGEQGHRGPRGEKGEKGTSGPRGRDGEPGTPGNPGPPGPPGPNGPPGLGG
NFAAQMAGGFDEKAGGGAQMGVMQGPMGPMGPRGPPGPTGSPGPQGFQGSPGEAGEPGQA
GAMGPRGPPGPSGKPGDDGEAGKSGKSGERGPSGPQGARGFPGTPGLPGIKGHRGYPGLD
GTKGETGALGSKGESGAPGESGAPGPMGPRGLPGERGRPGPSGVAGARGNDGLPGPAGPP
GPVGPSGAPGFPGSPGSKGEAGPTGARGPEGAQGPRGESGTPGSSGPSGASGNPGTDGIP
GAKGSSGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGTSGDPGITGFKGEAGPKGELGPA
GPQGAPGPQGEEGKRGPRGEPGAAGPIGPHGERGSPGNRGFPGQDGLAGPKGAPGERGPS
GASGPKGANGDPGRPGESGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGAR
GQPGVMGFPGPKGATGEPGKSGEKGLVGAHGLRGLPGKDGETGAAGPPGPAGPAGERGEQ
GQPGPSGFQGLPGPPGPPGEGGKPGDQGVPGEGGAAGATGPRGERGFPGERGAAGSQGLQ
GPRGLPGTPGTDGPKGAIGPAGGGGAQGPPGLQGMPGERGGSGIPGPKGDRGDLGEKGPE
GAPGKDGGRGLTGPIGPPGPGGPNGEKGESGPAGPSGAPGTRGAPGDRGETGPPGPAGFA
GPPGSDGQPGLKGEMGESGQKGDAGAPGPQGPSGAPGPAGPTGVFGPKGARGAQGPSGAT
GFPGAAGRVGPPGPNGNPGPAGPAGPSGKDGPKGVRGDGGPPGRQGDAGLRGPAGASGEK
GDAGEDGPPGALGPSGPQGLGGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGGSGDR
GPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGSPGIKGDRGNTGPTGAPGAPGGPGST
GPVGPTGKQGDRGEAGAQGPAGPPGAAGARGMPGPQGPRGDKGESGESGERGQKGHRGFT
GLQGLPGPPGQSGDQGATGPAGPSGQRGPPGPIGPSGKEGTNGMPGPIGPPGPRGRGGET
GPSGPPGNPGSPGPPGPPGPGIDMSAFAGLGHTEKSPDPLRYMRADQASGNLRQHDAEVD
ATLKSLNNQIENIRSPEGSKKNPARTCRDLKLCHPDWNSGEYWIDPNQGCTVDAIKVFCN
METGESCVRSKPSSIPRKNWWSSKSKDRKHVWFGEIMNGGFHFSYGDDNLAPNTAAIQMT
FLRLLSTEASQNITYHCKNSVAYMDASAGNLKKAVLLQGSNDVEIRAEGNSRFTYSVMED
GCTRHTGKWGKTVLEYRSQKTSRLPIVDIAPMDIGGADQEFGVEVGAVCFL
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcttcctggattcaaggactctactgctacttgcagctgcacaagtgtgccta
ttagccattgtcagatgtcaggacgataaccaggaggatgctcttagctgcttgcaggac
ggccagcgctttagtgacaaggacgtgtggaagcccgagccgtgtcgcatctgcgtgtgc
gacaccggaaccgtcctgtgtgacgaaatagtctgcgaggagctcagagactgccccaag
cccgaaatcccattcggagagtgttgccccatctgcgccgctgacccatcgccgcccatt
ggaacacctggagcaaagggccagaaaggtgaaccaggagatattacagatgtcgtagga
ccaagaggaccacctggcccaatgggcccaccaggagaacagggacatcgaggaccaaga
ggagaaaagggagagaagggaacatccggtcctcgtggcagagatggcgagcctggcacc
cccggaaaccctgggccccctggaccaccaggacctaatggaccccctgggcttggcgga
aattttgctgctcagatggcgggtggcttcgacgagaaggccggcggtggcgctcagatg
ggcgtgatgcaaggacccatgggcccaatgggtccccgaggaccacctggccccactgga
tctcctggccctcaaggattccaaggcagccccggagaggctggagaacccggacaagct
ggcgccatgggaccccgtggaccccctggaccctctggaaaacctggcgatgacggtgag
gctggcaaatctggaaaatcaggcgagcgtggaccttctggaccgcagggagctcgcgga
tttcccggaacgcccggcctgcctggcatcaagggacatcgaggataccctggtcttgat
ggtactaagggagagaccggtgctcttgggtcaaagggagagtctggtgctcctggagag
agcggagctcctggaccaatgggacctcgaggtctgcccggggagagaggtcgtcctgga
cccagtggcgttgctggtgcccgtggtaatgatggtttgcccggtcctgctggtcccccg
ggcccggtcggtccttctggagctcccggcttccctggttctcctggttcaaagggagaa
gctggtcccactggtgctcgtggacccgaaggagcgcaggggccccgtggagagtccggc
acgcccggatcatctggaccttcaggcgcttctggaaatcccggtactgatggtatcccc
ggagctaaaggatcatcaggcgctcccggtatcgcaggtgctcccggtttccccggacct
cgcgggcctcctgggcctcagggagcgaccggacctctcgggccaaaaggaacatctgga
gatccaggtatcacaggcttcaagggagaggcaggacctaaaggagagcttggaccagct
ggtcctcagggagcccccggcccacaaggagaagagggcaagagaggacccagaggcgaa
cccggtgctgctggaccaattggacctcacggagagagaggatctcccggtaaccgcggt
ttcccaggtcaagatggtctggctggtcccaagggtgcccccggtgagcgtggaccctcc
ggtgccagtggtcccaagggtgctaacggtgaccccggccgtcccggagagtccggtctt
cccggtgccagaggtcttactggacgtcccggtgacgctggtccccaaggcaaagtcgga
ccttctggagctccgggtgaagacggccgaccgggacctcctggcccacagggcgcccgt
ggacagcctggcgtcatgggattccccggccccaaaggagcaactggcgagcctggcaaa
tctggagagaagggattggttggagctcatggtctgagaggtctgcctggcaaagatgga
gaaactggtgccgccggaccccccggtcctgctggccccgctggcgagagaggagagcaa
ggtcaacccggtccctctggtttccagggtctgcccggcccccctggtccccccggtgag
ggaggcaagcctggagatcagggggttccaggagaaggcggagctgccggtgccactgga
cccaggggagagcgaggcttccccggagagagaggagccgccggttctcagggtctgcag
ggaccccgaggcctgccaggaacccctggaactgatggccccaagggagctattgggccc
gctggaggtggcggagctcagggaccccccggtctgcagggtatgcctggagagagagga
ggatccggtattcccggacccaaaggagacagaggtgaccttggagagaagggacctgag
ggtgctcctggaaaagatggtggcaggggtcttaccggtcccatcggccctcctggtcct
ggcggtcccaatggtgaaaagggtgaatccggtcctgctggtccttctggagctcctggt
acccgtggtgctcctggtgaccgaggtgagactggacctccagggcctgctggatttgct
ggaccccctggctctgacggacaacccggactcaagggagagatgggagagtctggccag
aagggtgacgctggtgcccctggaccacaaggaccatcaggtgcacctggacccgctggc
cctactggtgtttttggacctaaaggagcacgcggcgctcagggaccgtccggcgccacc
ggtttccctggagccgctggccgtgtcggaccccccggtcccaatggcaatcctggaccc
gctggtcccgccggcccctctggcaaagacggccccaagggcgtgaggggagacggcggc
cccccaggcagacagggcgatgctggacttcgcggtccggctggggcttctggagagaag
ggagacgctggagaggacggtccccctggtgctctaggtccctccggccctcagggtttg
ggcggtcagcgtggtatcgtgggtttgcctggacagcgtggcgagagaggtttccccggc
ctgcctggaccctctggtgagcctggaaagcaaggagctcccggcggcagcggagaccgc
ggaccccccggacccgtcggaccacccggactcaccggacctgcaggagagccaggcaga
gagggcaatcctggatctgatgggcctcctggtagagacggttctccaggaatcaagggt
gaccgcggtaacactggtcctactggcgctccaggtgcaccaggcggtcccggttccacg
ggcccggtcggtcccaccggaaaacagggagacagaggagaggctggtgcacaagggccc
gccggacctccaggagctgctggagcccgagggatgcccggaccccaaggacctcgcggt
gataagggtgaaagcggagagtctggcgagagaggacagaagggacacagaggcttcact
ggtctgcagggtctgcctggacctccaggtcaatctggagaccagggtgctactggacct
gctggaccttctggacagagaggaccacctggtcctatcgggcccagtggaaaggagggt
acaaacggtatgcccggacccatcggaccgcccggacctcgaggtcgcggtggagagacc
ggtccttcaggtcctcccggaaaccccggatctcccggtcctcccgggcctcccggcccc
ggcatcgacatgtccgccttcgccggcctgggtcacacggagaagtctcccgatcctctc
aggtacatgagagccgaccaggcctccggaaacctgcgacagcacgacgccgaggtggac
gccacgctcaaatccctcaacaaccaaatagagaacatccgcagtcctgagggctccaag
aagaacccggctcgcacctgtagagacctcaagctctgccatcccgattggaacagcgga
gagtactggatcgaccccaaccagggctgcaccgtggacgccatcaaggtgttctgcaac
atggagacgggcgagtcctgtgtccggtccaaaccgtccagcatcccgcgcaagaactgg
tggtccagcaagagcaaagaccgcaaacacgtgtggttcggagagatcatgaacggagga
ttccacttcagctacggcgacgataacctagcgcccaacacggccgccatccagatgacg
ttcctgcgtctgctgtccaccgaggcctcccagaacatcacctaccactgtaagaacagc
gtggcctacatggacgcttcggcgggcaacctgaagaaggccgtgctgctgcagggctcc
aacgacgtggagatccgcgccgagggcaacagccgcttcacctacagcgtcatggaggac
ggctgcacgagacacacgggcaagtggggcaagacggtcctggagtaccggtcgcagaag
acctcccgccttcccatcgtggacatcgcacccatggacatcggtggtgccgaccaggag
tttggagtggaagtgggcgccgtgtgcttcttgtaa
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