Phyllopteryx taeniolatus (common seadragon): 133484240
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Entry
133484240 CDS
T09737
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptao04121
]
133484240 (pdzrn3b)
Enzymes [BR:
ptao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133484240 (pdzrn3b)
Ubiquitin system [BR:
ptao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
133484240 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
Sina_ZnF
zf-TRAF
Prok-RING_4
zf-rbx1
zf-RING_6
TRAF3_RING
PDZ_Tricorn
TRAF2_zf
U-box
IBR_1
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
133484240
NCBI-ProteinID:
XP_061642512
LinkDB
All DBs
Position
9:6586932..6702140
Genome browser
AA seq
1044 aa
AA seq
DB search
MGFELDRFSGTVDPDLKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVRQSSCPVKCQRIS
SKELNHVLPLKNLILKLEIKCDNHVRGCDAVVTLQHLAEHAGVCDYSPAKCRNEGCDEVL
SLRDVDAHMRETCDFRPAGMCESGCGLTLTQKEQRLNEHCCVRALKAQNGALQYKMMCLD
SEFKKQTIEANDREKALLAQLSAAHAELQTTAVKYQKKFAEYSDRIDSLTRTVTFSCKER
DTKSVAVVLLREGGSLGFNIMGGKPCVDDNDSTSNEGIFVSKIIENGPADKKDGLQIHDR
IIEVNAKDLSKASHDQAVEAFRTAKDPIMVQVLRRAPLPKLLSPTADTQLSDISTQTEIT
LQHIMPLAKLPPASPTVTVLEEYLLPEEHPPGHEYFDPNDFLDGINQDIEREELEYEEVD
LYRAKIQDKLGLTICYRTDDEDEAGIYISEIDPNSIAAKDGRIREGDKIVQINGIEIQNR
EAAVVLLTSEGNQNISLLVARPHIQLDEGWMDDDRNDFLDDLHMDMLEQQHHQAMQFTAS
MLQQKKHEEDGGTTDTATLFSNHHEKDSGVGRTDESTRNDESSEQENIADDHTTASNTLS
SYRKLTFSQDTLGSTDLPFSGESLISADFADADFLGIPADECERFKELLELKCQMRNGGI
HGLYPQGGRAEGQDQEVVDKELELLNEELHNIELECLNIVRAHKMQQLREQCRESWMLHN
SGFRNYNTTIDARRHELSDITEMPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLRRGA
ENQAGPSSANGRELKSLLSPLQDVCGPSRSKALTKDPDSLQLESKERKLGESSKPGRNFA
QPRSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSMCRDPIASSDLGQKMEWK
VKIRSDGTRYITKRPIRDKLLRERALRIHEERSGMTTDDDAISELKMGRYWSKEERKQHA
VRSKEQRQRREFMKQSRADCLKEQVSLEDKKEPNIIELSNKKMMKKRNKKIFDNWMTIQE
LLTHGTKSPDGTKVYTSLLSVTTV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgcttcagtggaacagtagacccggatttgaaatgcaatctg
tgcaataaagttctggaagaccctctgactactccgtgcggccacgtcttctgctccggc
tgcgttctaccttgggtcgtccggcaaagcagctgccccgtcaaatgccaacggatctcg
tccaaagagctgaaccacgtcctgcctttgaaaaacctcatcctaaagctggagatcaaa
tgtgacaaccacgtgcggggctgcgacgcggtggtgacgctgcagcacctggccgagcac
gccggcgtgtgcgactactctccggccaagtgcaggaatgagggatgcgacgaggtgctc
agcctgcgggacgtagacgctcacatgcgggagacgtgcgactttcgaccggcggggatg
tgcgagagcggctgcggcttgacgctgacgcagaaagagcagcgactgaacgagcactgc
tgcgtgagagccctgaaggcgcaaaacggcgcgctgcaatacaaaatgatgtgcctggat
agcgagttcaagaagcagacgatcgaagccaacgacagggagaaagcgctgctggcgcaa
ctctccgccgctcacgccgagctgcagacgacggcggtgaaatatcagaagaagttcgcg
gagtacagcgacaggatcgactctctcaccagaacggtgactttctcctgcaaggaaaga
gatactaaaagtgtggcagttgtccttcttcgtgagggcggatctctgggatttaacatc
atgggaggaaagccatgtgtggatgataatgacagcacttcaaatgaggggatctttgtg
tccaaaattattgagaatggaccagccgacaagaaggacggccttcaaatccacgaccgg
attatcgaggtcaatgccaaagacctatcaaaagcatcccatgatcaagcagtggaagcc
ttccgtactgccaaggatcccataatggtccaggttttgcgtcgggcccctctgcccaaa
ctgctctcccccaccgctgacacccaactgtcagatatcagcacccagactgaaatcacc
ctccaacacattatgcccctcgccaagttgccaccagcatcacccaccgtgacagtgctc
gaggagtacttgcttccagaggagcatcctcctgggcatgaatactttgaccccaatgat
ttcctggatggtattaatcaggacatagaacgtgaagagctagagtatgaggaggttgat
ctatacagagccaaaatccaagacaagctcggcctgacgatctgttacaggactgatgat
gaggatgaagctgggatttacattagtgagattgatccaaacagcattgccgctaaagat
ggcagaattagagaaggtgacaaaatcgtccagatcaatggcatcgagatccaaaaccgt
gaagctgctgttgtgctgctgaccagtgaagggaaccagaacatctctctattggttgcc
agaccacacatccagctggacgagggctggatggatgacgacaggaatgacttcctcgat
gacctccacatggatatgctggagcagcagcaccatcaggccatgcagttcactgcaagc
atgctacagcagaagaagcatgaggaagatgggggcaccactgacacggccacactattc
tccaatcaccacgaaaaggacagcggagttggtcgtactgacgagagcacacggaatgat
gagagttcagaacaggagaacatcgctgacgaccatacaacggcatccaacacactgagc
agctacagaaaactgaccttcagccaggacaccctcggaagtaccgacctgcctttcagc
ggcgagtcattgatctctgcagactttgccgacgccgactttcttggtatccccgcggat
gaatgtgagcgcttcaaagaactcctggagctcaagtgccaaatgaggaatggaggaatt
cacggcttgtatccccaaggtggcagggcagaaggccaagaccaggaggttgtggacaaa
gagctggagctgctcaatgaggagctgcataacatcgagctagagtgccttaatatcgtc
cgtgcccacaagatgcagcagcttagggagcagtgtcgtgaatcctggatgctccacaac
agtggcttccgcaactacaatactaccatagacgcacgccgccatgagctatcagacatt
acagagatgccggagaaatctgacaaagacagctccagtgcctacaatactggcgagagc
tgccgtagcactcctcttacactggagctgtctccagacaactctttgcgtcgtggggct
gagaaccaagctgggccatctagcgcaaatggcagggagctcaaatctctcctgtcccct
ctccaagacgtttgtggccccagcaggagtaaagcccttacaaaggaccccgattccctg
cagttagaaagcaaggagaggaaactaggagagtccagcaaacctgggaggaactttgct
cagccacgttcaccttataagcatgcacacatccccgcccacgcccagcactaccagagc
tacatgcagctaatccagcagaaatccgccgtagagtatgcccaaagtcagatgagcctg
gtcagtatgtgtcgggacccgatcgcttccagtgacttgggccagaagatggagtggaaa
gttaagatccgcagcgatggtacccgctatattaccaagcggcccattcgggacaagctg
ctgagggagcgcgccctgcgcatacacgaggagcgcagcggtatgaccacagacgacgat
gccattagcgagctgaagatgggccgctactggagcaaggaagagaggaagcagcacgct
gtccgttccaaggagcagcggcaacgtcgcgagttcatgaagcaaagccgagccgattgt
ctgaaggagcaagtcagccttgaggacaaaaaggaacccaacatcattgaactcagcaac
aaaaagatgatgaaaaagagaaataagaaaatatttgacaactggatgaccattcaggaa
ctgctgacccatggtaccaagtcaccagatggcactaaagtttatacctcactcttgtct
gtgactacagtctaa
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