Phyllopteryx taeniolatus (common seadragon): 133484388
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Entry
133484388 CDS
T09737
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133484388 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptao03021
]
133484388 (polr1a)
Enzymes [BR:
ptao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133484388 (polr1a)
Transcription machinery [BR:
ptao03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
133484388 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
HMG_box_2
TadB_TadC_N
Motif
Other DBs
NCBI-GeneID:
133484388
NCBI-ProteinID:
XP_061642841
LinkDB
All DBs
Position
10:complement(1346550..1394977)
Genome browser
AA seq
1686 aa
AA seq
DB search
MLFMKEAPWRRLEGISFGMYSAEEIRKLSVKAITNSKLLDGVGNAALNSLYDLALGPADN
KEVCSTCCQDFNNCPGHLGHVELPLPVYNPLFFDKLFLLIRGSCLKCHMLTCPRAAVHLL
LNQLKLLDHGAMHQVYHVEEVLNQFLEATDKATADDIAAMLKEFTDSVVVTDGSGNSKPI
RHLVEKKSSLINDFWKIHMKSRNCPHCRSKRFTVRREHNSKLIVTMPPESKTSGKTVGVT
TGDKAYMTASTAREHANKLWENEGFFLKCLFSGVVNNSGSNEEQMGFSPAHFFLELLVVP
PCRYRPINQLGDQIFTNGQTVNMQAVMKDCTIVRKLLSLIAAENVTQQDESQAKEETDQS
ILSGIPGLTLTDKLYNIWIRLQTHVNIVFDSDMDKIMTEKYPGIRQILEKKDGLFRKHMM
GKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLNGPNVHPG
ATMVISEDGRRTILSTTSFAQREAVAKQLMTPSLGPLKMPMKIVNRHIKNGDVLLLNRQP
TLHRPSMQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHVPQSELGRAEAYTLVST
NQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYTELVYRGLTDKPGRIKILPPA
ILKPQKLWTGKQVVSTVVLNVIPEKHLPLNLVGKSKIPSKAWIQVPPRAAPGYRPDTMCD
SQVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYRG
FTLGVEDILVKPGANKKRKRIIQQSLKIGARALRAAFNLPPDVDEAEARSHWQDAHLTPD
QRDFSTADHKFKEVANQVNNDINKVCMPVGLHSSFPDNNLQLMVQSGAKGSTVNTMQISC
LLGQIELEGRRPPLMPSGKSLPCFQPYDPAPSAGGFVSGRFLTGIKPQEFFFHCMAGREG
LVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIPKTQFLQP
RQFSFIEDNFEVIKKSQRLDEVLTRLDTQSASRHFSAIQRWKAKRELTSPRRGAFLLFSQ
KKMARLKQTEHGAIKNVCGRDVAVLKLVEQWHALDEAGRSKYKRKSSRCPEPSLGVFRPD
VSFGSVSESFRDLTEKYLQNRDPMSQHNLDTDRLRQLLHYKWQRSLCDPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASGKIKTPMMSVPVLYSKKALKKA
QKLRRKLTKVCLAEVLHKVDVVEALRIESHRHSKMRTFKITFSFLHPNCYAEDTLLSPQQ
ILHYMETRFFVLLLKAIEKHSAKMASIAVETRKATTRDKYNVNEELAVAAGGDDGEEEQE
REIVDDQGNEGDADASDAKRKDKQEEEVDYDSEDEGEDEDNVGEEEEEVNGQIDVDEFHM
ESSSVRLQTKKRAAKSRRGKEATDQMRVNAVLNSHPAIEGYCYDVKHELWCEVNLALSVS
KVHFDLTSVVSTLAQDAVIMETRGLTRCLLSETTTKTGDKEMVLNTEGINMHEMFKHSDI
LDVNRLYSNEVHAMAKTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVY
NPLNRHSITSNSSPLQQMTFETSYKFLKQATMLGSRDQLESPSACLVVGKVVKGGTGLFE
LKQPLQ
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttatgaaagaagcgccatggcggcgattggagggcatatcttttggcatgtac
tctgccgaagagataaggaagctgagtgtgaaggcgatcacaaactcaaagttgcttgat
ggcgttgggaatgcggccctaaacagcctgtacgacttggccctgggaccagcagacaac
aaagaggtatgttcaacttgctgtcaggatttcaacaactgtccaggacacctgggacat
gtcgaactgccgctacctgtgtacaacccactattttttgataaactctttctgttgatt
cgtggctcatgtctgaagtgccacatgttgacatgtccacgggcagccgtccaccttctg
ttgaaccaactgaaattactggaccatggagccatgcaccaggtttaccacgttgaagaa
gttcttaaccagtttctggaggcgacggacaaagccactgctgatgatattgcagccatg
ctcaaagaattcacagattcagttgttgtaactgatggctcaggaaacagcaaaccgata
agacaccttgttgaaaagaaaagcagtttgataaatgatttttggaaaatccacatgaaa
tctcggaactgtccccactgcaggagcaagcggttcaccgtacgacgtgagcacaacagt
aagctgatcgtcacaatgcccccggaatcaaaaacttctggaaaaactgtgggcgtgacg
actggagacaaagcctacatgactgccagtactgcaagagaacacgccaacaaattgtgg
gagaatgaaggttttttcctgaaatgtctgttctccggggtggtgaacaactcgggatca
aatgaagagcaaatgggtttctctccggctcacttcttcctggagctacttgtggtccca
ccttgcaggtatcgtccaatcaatcaactgggtgatcagatttttaccaatggtcagacg
gtcaacatgcaagccgtcatgaaggactgtacaattgtgagaaaactgctttctctcatt
gctgctgagaatgtaactcagcaagatgagtctcaggcaaaagaagagacagaccagtct
attctctcagggattcctggactgacattaacagataaactttacaacatctggatccgt
cttcagacccacgtcaacattgtctttgacagtgacatggacaaaattatgacagaaaag
taccctggaatcagacagatcctggagaaaaaggatggattgttccgaaaacatatgatg
ggaaaaagagttgattatgccgcaagatctgtcatctgtccagatatgtacatcggaacc
aatgagatagggattcccatggtgttcgctacgaagctgacctacccacagcctgtcacg
ccatggaacgtgaaggagcttcgtcaggcagttctgaatgggccaaatgtacaccccggt
gctacgatggtgattagcgaggatgggaggagaaccatcttgtcaaccaccagctttgca
caaagagaagcggttgctaagcagctgatgacgccctctctaggtccactcaagatgcca
atgaaaatagtgaaccgccacattaagaatggagatgttttgttgttgaacagacagcca
actctgcaccgaccgtcaatgcaggctcactgtgcacgcattttgcctggagagaaggtc
ctgaggcttcactatgccaactgcaaagcatacaatgcagactttgatggcgatgagatg
aatgctcacgtccctcagagtgagcttggtcgagcggaggcctacacattagtcagcacc
aaccaacagtaccttgtgccaaaggatggaaagcctttggctggtctgatacaagaccac
atggtgtcgggtacacggatgacaattcgaggctgtttcttcacgagagaccagtacact
gaacttgtgtacagagggctgactgacaaaccgggccgaattaaaatcctcccaccagct
atactcaagccacagaaactctggacaggaaagcaggtggtgtccaccgtcgtcctcaat
gttattccagaaaagcatttgccattgaacctggttgggaaatcgaaaatccccagcaaa
gcatggatccaagttcccccacgagcagctccaggatatcgacctgacaccatgtgtgac
tcgcaggtggtgatccgtcagggggagttgttagtgggtgttctggacaaagctcactat
ggctcatcagcatatggtctggtccattgttgctatgaactttatggaggggagaccagc
ggcaaactgctcagctgtctcgccagactctttactgcctaccttcagttatatagagga
ttcactctgggtgttgaggacatcctggtgaaaccgggtgcgaacaaaaaaaggaaacgc
attattcaacaatcactaaagattggtgcaagagccctccgggcagcattcaacctcccc
cctgatgtggatgaagcagaagccaggagccattggcaggatgctcatctcaccccagac
caacgggatttcagcacggctgaccacaaattcaaagaagtggccaaccaagtgaacaat
gacattaacaaggtgtgcatgccagttggccttcactcttcgttcccagacaacaacctc
caactgatggtccagtcaggtgccaagggttccaccgtcaacaccatgcagatctcatgt
ctactaggtcagattgagttagagggtcgtagacctccactgatgccctctgggaaatca
ttaccatgtttccagccatatgacccagcgcccagtgctggtggatttgtttctggcagg
ttcctcacaggcatcaaaccacaggaatttttcttccattgcatggctggcagagaggga
ctggtggataccgctgtaaaaacctccagatcaggatacctgcagcggtgtgtcataaag
catctggagggtttggtggtccagtatgatctgactgtgagggacagtgatggatctgta
gtccagttcctgtatggcgaagatgggcttgatatccctaagacacaattcctgcagcca
aggcagttttccttcatagaggacaactttgaggtaataaagaagtcccagaggttggat
gaggtgttgacacgattggacactcaaagtgcaagtcggcatttttcagccatacaacgc
tggaaagcaaagagagagttgacttcccctcgcagaggagcattcctattgttttcccaa
aagaagatggccaggcttaagcagaccgaacatggagcaataaaaaatgtgtgcggcaga
gatgtggctgtgcttaagctggtggaacagtggcatgctcttgatgaagctggacgatca
aaatacaaaagaaagtcctcccgctgccctgagcccagcctgggcgtgttcaggcctgat
gtaagctttggatccgtttctgaaagctttcgtgacctcacagagaaatacttgcagaat
cgagacccaatgagtcaacacaacttggatacagacagacttcgacagttgttgcattac
aagtggcagcggtcactgtgtgatccaggggaagcggtgggtctgctggcagctcagtcc
attggtgagccctcaacccaaatgaccctcaacaccttccactttgctggcaggggagag
atgaatgtcacattgggaatacctcgacttcgagagatactaatggtggccagtggcaaa
atcaagactccaatgatgagtgttccagtgctgtacagcaagaaagccttaaagaaagct
cagaagctccgtagaaaacttaccaaggtctgcttggctgaggtactgcacaaggtcgat
gtggttgaggcgctgcgcattgagagtcaccgtcactcaaagatgcggacatttaaaatc
acttttagctttcttcatcctaactgttacgctgaagatacgctgctctcaccccaacag
attctccactacatggaaaccagattttttgtactgctccttaaagccattgaaaaacat
agcgccaagatggcatccattgctgtggagaccaggaaggccaccaccagggacaaatac
aatgttaatgaggaattggctgttgcagcagggggggatgacggggaagaagagcaggag
agagagatagttgatgaccaggggaatgaaggtgatgctgatgcgtcagatgccaagaga
aaagacaagcaagaagaggaagtcgattatgacagcgaggacgaaggtgaggatgaagac
aatgtgggagaggaggaggaggaggtgaatgggcagattgatgtggatgaattccatatg
gagtcctcgagcgtgagattgcagacgaaaaagagagcagcaaaaagtaggcgaggaaaa
gaggctacagatcagatgagagtgaacgctgttctgaattcccacccggcaatagagggt
tactgctatgacgtcaagcatgaactctggtgtgaagtgaacctggctttatcagtgagc
aaagtgcactttgacctgacatcagttgtgtcaacactggcccaggacgccgtcatcatg
gaaaccaggggcctgactcgatgccttctgagtgagaccacaactaagactggagacaaa
gagatggttctcaacacggagggcatcaacatgcacgaaatgttcaagcacagtgatatc
ttggatgtcaacaggctctattccaatgaggtccatgccatggcgaaaacttacgggatt
gaagtggctctcaaagtcatagagaaagaaattaaagatgtctttgcagtttatggtatc
gaggtggaccccagacatctgtcactagtagcagactacatgtgctttgagggggtgtac
aacccactgaaccgccattccatcacatcaaactcctcccctctgcagcagatgactttt
gagaccagctacaaattcctcaaacaggctaccatgctgggctctcgtgatcagctcgag
tctccatcagcctgcctggtggtgggaaaggtcgtcaaaggaggaacaggactttttgaa
ctcaaacaacctctgcaatag
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integrated database retrieval system
