KEGG   Phyllopteryx taeniolatus (common seadragon): 133484995
Entry
133484995         CDS       T09737                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ptao  Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03013  Nucleocytoplasmic transport
ptao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133484995 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    133484995 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptao03019]
    133484995 (thoc3)
   03041 Spliceosome [BR:ptao03041]
    133484995 (thoc3)
Messenger RNA biogenesis [BR:ptao03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     133484995 (thoc3)
Spliceosome [BR:ptao03041]
 Complex C
  Other components
   EJC/TREX
    133484995 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133484995 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_Aladin EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_EML eIF2A DSE1_N Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_WDR35_TULP_N RMC1_N WD40_MABP1-WDR62_1st Beta-prop_NOL10_N NBCH_WD40 Tricorn_2nd WD40_RFWD3 WDR90_beta-prop_4th PD40 Beta-prop_SPT8 B-prop_COPA_B_2nd TRM82_WD Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Beta-prop_ACSF4 ASA1 Peptidase_S9_N PAC11 PROPPIN Cytochrom_D1 WD_LRWD1 DPPIV_N Beta-prop_SCAP WDCP
Other DBs
NCBI-GeneID: 133484995
NCBI-ProteinID: XP_061644249
LinkDB
Position
10:complement(21562119..21572103)
AA seq 321 aa
MASRYYQTMQESFKTNNKSREFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDLFVTASGDKSVRIWDVRTTKCMAVVTTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHKTKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINIL
SYPELKTIQSIKAHPSNCICIKFDPTGKYFATGSTDALVSLWDVDELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCLPTFTVAWHPKRPLLAYACDDKD
CKYDNNREAGTVKLFGLPNDS
NT seq 966 nt   +upstreamnt  +downstreamnt
atggcgtcgcgctactaccagacgatgcaggagagtttcaaaacgaacaacaaaagtcgc
gagttcccggcgcattcggccaaagttcactcggtggcgtggagctgcgacggcagaaga
ctcgcgtcgggatctttcgacaaaaccgccagcgtttttgtcctggaaaaagaccgactg
gtgaaggagaacaactaccgtgggcacagcgacagcgtggatcagctgtgctggcacccc
accaatccggacctcttcgtcacggcgtcgggtgacaaaagtgtgcgaatatgggacgtg
cgcaccactaagtgcatggccgtcgtcacgactaaaggcgagaacattaacatctgctgg
agtccggacggccaaacgatcgctgtgggtaacaaggatgacgtggtcaccttcattgac
gccaaaacccacaagaccaaggccgaggagcagttcaaatttgaagtcaacgagatctcg
tggaacaacgacaacaacatgtttttcctcaccaacggcaacggatgcatcaacatactc
agttaccccgagctgaagaccatccagtcgatcaaagctcacccttccaactgcatctgc
atcaagtttgacccgacgggcaaatacttcgccacgggcagcacggacgctctggtcagt
ctttgggacgtagacgagttggtgtgcgtgcgctgcttctccaggctggactggcccgtg
aggacgctaagcttcagtcacgatgggaagatgttggcgtcggcgtcggaggaccacttc
atcgacatcgccgaggtggaaacaggcgagaagctttgggaggttcagtgcttgcccacg
tttacggtggcctggcaccccaagcgcccccttctggcgtacgcctgcgatgacaaggac
tgcaagtacgacaacaaccgtgaggcgggcaccgtcaaactcttcggcctcccgaacgac
tcctga

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