Phyllopteryx taeniolatus (common seadragon): 133485154
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Entry
133485154 CDS
T09737
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03020
RNA polymerase
ptao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
133485154 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
133485154 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptao03021
]
133485154 (polr2b)
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133485154 (polr2b)
Enzymes [BR:
ptao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
133485154 (polr2b)
Transcription machinery [BR:
ptao03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
133485154 (polr2b)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
133485154 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
133485154
NCBI-ProteinID:
XP_061644533
LinkDB
All DBs
Position
10:complement(30704183..30726072)
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AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAFTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTKETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPDNDDELDINNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQDGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRLPYACKLLFQELMSMSIAPRMMTT
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataaccagtacgatgaagacgacgacgagatcacgccagat
ctgtggcaggaagcctgctggattgtcatcagctcgtattttgacgagaagggtttggtg
cggcagcagctggattccttcgacgagttcatccagatgtcggtccagaggatcgtggag
gacgcgccgcccatcgacctgcaggccgaagcccagcacacctcgggagaggtggaggag
cccccgcgttacctgctgaagttcgagcagatctacttgtccaagcccacccactgggaa
cgagacggcgccccgtcacccatgatgcccaacgaagctcgactgcgaaacctcacatac
tcggcccctctgtacgtggacatcaccaagaccatcatcaaggagggcgaagaccagctg
cagacgcagcaccagaagaccttcatcgggaagattcccatcatgctgcgctccacctac
tgcctgctcagcggcctgaccgaccgtgacttgtgcgagctgaacgagtgcccgctggac
cccggcggatacttcatcatcaatggctcggagaaggtgctgattgctcaggagaagatg
gccaccaacacagtgtacgtgttcgccaagaaggactccaaatacgccttcacgggcgag
tgccgctcctgcttggagaactcgtcgcggcccaccagcaccatctgggttagcatgatg
gcgcgaggaggacagggcgtgaagaagagcgccatcggccagaggatcgtctccacgctg
ccgtacatccgacaggaagtccccatcatcatcgtgttccgagcactgggctttgtgtcc
gaccgggacatcctggagcacatcatctatgactttgatgaccctgagatgatggagatg
gtgaagccgtcgctggacgaagccttcgtcatccaggagcagaacgtggccttgaacttc
atcgggtccagaggagccaaacctggagtcacgaaagagcggaggatcaagtacgccaaa
gaagtcttgcagaaagaaatgctgccgcacgttggcgtcagcgacttctgcgagaccaag
aaggcctacttcctcgggtacatggtccacaggctgctgctggccgctctgggcagacga
gagctggacgacagagatcactacggcaacaagaggctggacctggccggaccgctcctg
gcgttcctcttcagaggaatgttcaagaaccttctgaaggagatccgcatctacgcacag
aagttcatcgaccgaggcaaagacttcaacctggagctggccatcaagaccaggatcatc
tcggatggactcaagtactcgctggccacgggcaactggggcgatgtcaagaaggcccac
caggcccgtgcgggcgtgtcccaggtgctgaaccgactcaccttcgcgtccaccctgtct
cacctgcgccgcgtcaactctccgatcggacgcgacggaaagctggccaaaccccgacag
ctgcacaacacgctgtgggggatggtgtgccccgccgagacccccgagggtcacgctgtg
ggcctggttaagaacttggccctgatggcttacatctctgtgggatctcaaccttctccc
atcctggagttcttggaggagtggagcatggagaacctggaagagatctcgcctgctgcc
attgctgacgccacaaagatcttcgtgaacggctgctgggtcggaatccacaaggatccc
gagcagctgatgaacacgctgaggaagcttcggcgccagatggacatcatcgtgtccgag
gtgtccatgatccgagacatcagagagcgcgagatcaggatctacacggacgccgggcgc
atctgcagacctctcctgattgtggagaagcagaaactgttgctcaagagaagacacatc
gaccagctcaaggagagagagtacaacaactacagctggcaggacctagtggcgagcggc
gtggtcgagtacatcgacacgctggaggaggagacggtgatgctggccatgacccccgat
gaccttcaggagaagggtgtggcctactgctccacctacacccactgtgagatccacccg
tccatgatcctgggggtctgcgcctccatcatcccctttcccgatcacaaccagtctccc
aggaacacgtaccagtcggctatgggcaagcaggccatgggcgtgtacatcactaacttc
cacgttcgcatggacacgctggcacacgtcctgtattaccctcagaagcccctggtgacc
acacgctccatggagtacctgcgcttcagagagctgcccgcaggcatcaactccatcgtg
gccatcgcctcgtacacgggatacaaccaggaggactcggtcatcatgaaccgctcggcc
gtggaccgaggattcttccggtccgtcttctatcgctcctacaaagagcaggagtccaag
aagggcttcgaccaggaggagatcttcgagaaacccaccaaggagacctgccaggggatg
agacacgccatctacgacaaactggacgacgacggtctgatagccccgggggtacgcgtg
tccggcgaggacgtgatcatcggtaagactgtgactctgcccgacaacgacgacgagctg
gacatcaacaacagacgctacacgaagcgagattgcagcacctttctgcgcaccagtgag
accggcatcgtggaccaggtcatggtcacgctcaaccaggacgggtacaagttctgcaaa
atccgggtgcgttctgtccgaatccctcaaatcggagacaaatttgccagcagacacgga
cagaaaggaacctgcgggatccagtacagacaggaggacatgccgttcacgtgtgagggc
atcacgcccgacatcatcatcaaccctcacgccatcccgtccagaatgacggtcggacat
cttattgagtgcctgcaaggcaaggtttctgccaacaaaggcgaaatcggcgatgccacg
cccttcaacgacgccgtcaacgtgcagaaggtctccaacctgctctcggagtacggttat
cacctgagaggaaatgaggttctgtacaacggcttcacgggccgcaagctgacgtctcag
atcttcatcgggcccacgtactaccagcgcctcaagcacatggtggacgacaagatccac
tccagggcccgcggacccgtgcagatcctcaacaggcagcccatggagggacgctcccgc
gacggcggccttcgtttcggcgagatggagcgcgactgtcagatcgctcacggcgccgct
cagttcctgcgcgagcgtctgttcgaggcgtccgacccctaccaggtgcacgtgtgcaac
ctgtgcggactcatggccatcgccaacacgcgcacgcacacgtacgagtgtcgcggctgc
cgcaacaagacgcagatctcgttggtgcgcctgccctacgcgtgtaaacttctcttccag
gagttgatgtccatgagcatcgcgccccgcatgatgacgacgtag
DBGET
integrated database retrieval system
