Phyllopteryx taeniolatus (common seadragon): 133486078
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Entry
133486078 CDS
T09737
Symbol
col9a1b
Name
(RefSeq) collagen, type IX, alpha 1b
KO
K08131
collagen type IX alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao04510
Focal adhesion
ptao04512
ECM-receptor interaction
ptao04518
Integrin signaling
ptao04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133486078 (col9a1b)
04518 Integrin signaling
133486078 (col9a1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133486078 (col9a1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133486078 (col9a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptao00535
]
133486078 (col9a1b)
Proteoglycans [BR:
ptao00535
]
Extracellular matrix (ECM) proteoglycans
Others
133486078 (col9a1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
133486078
NCBI-ProteinID:
XP_061646686
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All DBs
Position
11:14215862..14231427
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AA seq
676 aa
AA seq
DB search
MARAPGYRGPLLGLLLHFGLLCSAQRVQGPTGPAGVPGIDGIDGDRGSDGPAGPAGPDGE
PGRVGSSGLPGIPGNDGLTGPIGEPGPDGPPGQKGEPGTVGPRGTTGLGSDGPPGPPGPG
GLPGPLGKTGPPGTMGVRGPQGARGPTGPRGAAGMLGNVDLCPNSCPHGTSGHPGLPGMK
GHKGVKGEAGEPGKQGHKGEEGEQGGQGEVGSQGPTGAHGIRGATGIMGTKGEMGARGPD
GDPGPQGVAGASGDQGQRGVMGESGPKGEQGLQGPRGMTGLPGPKGDAGLPGVDGREGIP
GMPGAKGGIGTPGFSGEVGPQGLPGLPGSPGSKGQGGPKGDAGQTGFPGTMGSAGKMGER
GEQGEAGSVGPIGEPGELGEQGPVGPVGKPGSRGHKGDPGLTGLPGPPGVPGVKGERGER
GEVGPKGDQGPQGDEGNPGEKGDNGEHGEGGAKGETGNSGEPGRRGPEGTRGQPGIEGPP
GTPGPRGMQGNRGPPGVRGTQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPESGAV
GLPGKPGPSGPPGAPGDNGFPGQAGARGLPGLKGPPGQLGAKGHKGEMGDRGSRGPTVRG
AKGQQGPPGLPGEAGKPGYGQDGRDGQRGPPGLPGQLGVPGPPGSAGPNGYCDPSSCNLS
AGAQRVDVKGPATARN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcccccggctatcgagggcctctcctggggctgcttctgcactttggtctg
ctttgctcggctcaaagggtccaaggacccactggacctgcaggtgtaccaggaattgat
ggcattgatggtgatagaggatcagatggcccagctggtcctgctggacctgatggggag
cctggtagagttgggtcttctggattacccggaattcctggaaatgatggtttgaccggc
cctatcggcgagcccggacccgacggtccccccggacagaaaggtgaacccggaacagtt
ggacctcgtggaactactggtctcgggtcagatggacctcctgggccacctgggcctgga
ggacttccgggcccactgggaaaaacaggaccacctgggacaatgggtgtgagagggcca
caaggagctcgtgggccaacagggccaaggggggcagctgggatgctgggcaacgtcgac
ttgtgtcccaactcttgtccacacgggacctctggacatcccggccttcctggcatgaag
ggccacaaaggtgttaaaggtgaagcaggagaacctggaaaacaagggcacaagggggag
gaaggagaacaagggggtcaaggggaagtcggctcacaaggaccgacgggtgcccacggc
atccgtggagccacaggaataatgggcactaagggagagatgggggctcgaggtcctgat
ggagatccaggtcctcagggtgttgccggtgcatccggtgaccaaggtcagcgaggggtg
atgggtgagtctgggcctaaaggtgaacagggtttacaagggccaagaggcatgacaggt
ctgccaggtcccaaaggagacgctggtttaccaggtgtggatggccgtgagggtattcca
ggcatgccgggagcaaagggagggattgggacgcctggattttctggagaagttggccct
cagggacttcctggtttgcctggctcacctggatcaaaaggacagggtggccctaaggga
gatgccggtcaaacaggcttccctggaacgatgggttcagccggaaaaatgggcgaacgc
ggggaacaaggcgaggctggatccgttggacccatcggtgaacccggagaattgggagaa
caaggcccagtgggtccagttggcaagcctggttccaggggacataaaggtgaccccggt
cttactggtcttccgggccctcctggcgtccctggagtaaaaggagaaaggggcgagcga
ggagaagtaggacccaagggagaccagggtccacaaggtgatgagggaaaccctggagag
aaaggagataatggtgaacatggagaaggtggagcaaagggagagactggaaattccggc
gagcctggcagaagaggtccagagggaactcgaggccagcccggaatcgagggtccaccc
ggcacacctgggccacgaggcatgcaggggaacagaggtccacctggagtccgaggaaca
caaggtcctgcgggtaaagagccgagcgaccagcacatcaagcaggtctgcatgcgagtc
atgcaagaacaactggcccagttggctgctagtttgagaagaccagagtccggtgcggtc
ggcttacctggcaaacctggaccttcgggccctcctggggctcctggagacaatggtttc
ccaggacaggcaggggcaagaggccttcctggactcaaaggaccaccaggacaacttgga
gcaaaaggacacaaaggtgaaatgggtgacagaggctcccgagggcccacagtgcgggga
gccaaaggtcagcaaggacctccaggactccctggtgaggctggcaaacctggctacggt
caggacggtcgcgatggccagaggggacctcccggtcttcccggacagctcggtgtacct
ggacctcccggttcagccggtcctaatggttactgcgacccatcctcatgcaacctatcg
gcgggcgctcagcgtgtggatgtgaagggacctgcaactgcaaggaactaa
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