Phyllopteryx taeniolatus (common seadragon): 133486848
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Entry
133486848 CDS
T09737
Symbol
col18a1a
Name
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptao04147
]
133486848 (col18a1a)
00535 Proteoglycans [BR:
ptao00535
]
133486848 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:
ptao00536
]
133486848 (col18a1a)
Exosome [BR:
ptao04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133486848 (col18a1a)
Proteoglycans [BR:
ptao00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
133486848 (col18a1a)
Glycosaminoglycan binding proteins [BR:
ptao00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133486848 (col18a1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
133486848
NCBI-ProteinID:
XP_061648567
LinkDB
All DBs
Position
12:complement(8812813..8887517)
Genome browser
AA seq
1501 aa
AA seq
DB search
MQHQINNQALPTSQAVTPSHTLTQTSDSQSKHSQFVSQFVATYTVAESYTPAKDEKEFPK
PYLNRKPPHCLMLDTALQFCSSMTGKRFVVPNHLNQTSLEEIQVLLHDWAWLLRSKCHRG
LEMFFCPLLLPKCGSPMTVLPCRSFCEGLRDSCWTLLDEGRLPLECHQLPEEEDDRYQCL
SVFNLKEDSVSLLQLIGDAPPNEITRVYGPDSAPGYVVGSMTNTGQLARAYLPNPFYRDF
SLIFNLKPTSDRGGVIFSVTDATQQIMYVGVKLSPVQGGNQNVILYYTEPDSETSYEAAR
FLVPSLRDTWTRFAIAVKDDKVMFYLNCDIDPLVLRIERSPDEMELEAGARVFVGQAGGS
DPDKFLGVMSELSVVGDPRAAERHCEEDNDDSDMASGEGSGNVETRPSKPAVAKHTWTTA
PPSLRPIQQPPVARQEETSTLRHTGSIGAKGEKGDRGEKGDRGLTGPKGDTSYSTAVSSQ
GGDRGGKGEPGEKGAKGNAGFGYQGKKGDPGTPGPPGPPGPPGVASEVSVCKEGSDPSCV
PGARGPPGPAGVPGAQGPPGEDGEPGDPGEDGKRGADGPPGFPGTPGNPGLKGEKGDRGD
GQNGPRGPPGPPGPPGPGSRSTFVDMEGSGFPDLESVRGLPGPPGPPGLPGVPGLATPNT
ASSSGAVGPPGHDGAPGQPGLSGLPGVDGHPGPPGTKGEKGDSGVLGHPGPGGEKGAQGD
AGLPGPTGEPGLAGLPGPMGPAGPPGPPGPPGPRYHVGFDDMEGSGGIFSNGPPGVRGPE
GRQGPPGLPGLPGKPGLPALAGQKGSTGPEGRDGQPGLDGFPGVQGAKGDRGDQGERGEP
GRDASGVPGPPGAPGPPGQIVYQPSDNFDGAVGSVGPQGGPGMPGRAGFPGPMGPKGDSG
EPGPPGYGLKGEKGEPGLVIGPDGSPLFSAGLTGFKGNRGPPGPVGPPGQYGPPGIKGEI
GMPGRPGRPGVNGYKGEKGEPASGYGYPGVPGPPGPPGPAGPALDRFYGYDGTSRNYPAI
KGEKGDYGERGLPGAPGVFNFDIHTLKNDLKGEHGDPGVKGEKGEPGGYYDPRFGGPLGP
QGPTGKTGLTGPKGDSVMGPPGPQGPPGKPGIGYDGRQGPPGPPGPPGPATSPSLPGAFW
PSQSANVPGAPGPPGPPGSPGLSSGVAVLRSYDTMLATARRQAEGSLIYIIDKADLYLRV
RDGLRQVMLGEYSPFFRDLENEVAEVQPPPVILYPQSHDQSQNNGAGHYSQTVSGIRPIE
PPPHPPVDPRYPSQYDPRFPDQRHSGQTDGRLATEQAENRYPVTPQRRPSPPVLQPAVHG
DKSESGLHLIALNAPQTGNMRGIRGADFLCFQQARAVGLKGTFRAFLSSKLQDLYTIVRR
SDRDTLPIVNLKDQVLFDSWESIFDDNASRMRNSVPIYSFDGRDILRDSAWPHKMVWHGS
SNKGHRQTDHYCETWRAGEQAVTGLASAIQSGHLLQQHSRSCSNSHIVLCIENAFTSHSK
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatcaaatcaataatcaggcattacctactagccaggcagtgactcctagccat
accttaacacaaacatcagacagtcagtcaaaacacagccaatttgtcagtcagtttgta
gctacatatacagttgcagagagctatacaccagcaaaagatgagaaagaatttccaaaa
ccatatcttaatagaaaacccccacattgcttaatgctggatactgctcttcagttctgc
tcatccatgactggcaaaagatttgttgtgcccaatcatctaaaccagaccagcttggaa
gaaatccaagtactcctacatgactgggcttggttgttgaggtcaaagtgccaccgtggt
ttggagatgttcttctgtcctctgctgctaccaaagtgtggctctccaatgacggtgttg
ccttgccgaagcttttgtgaaggtttaagggacagttgctggacgcttctggacgaggga
cgcctccctttggagtgccaccaacttccagaagaggaggatgatcggtatcagtgcttg
tcggtttttaatctgaaagaagacagtgtctccctgctgcagctgatcggggacgctcct
ccaaatgagatcacacgagtttacgggcctgactccgctcccggctacgtggtggggtcg
atgacaaacacgggccagttggcccgcgcctacctgccgaacccattctaccgggacttt
tccctcatcttcaacttgaaacccacatctgacaggggtggcgtgatcttctcggtcaca
gacgccacacagcagatcatgtatgtgggtgtcaaactgtcacccgtgcagggcggaaac
cagaatgtcatattatactacacagagcctgactcagagacgtcatacgaggccgccagg
ttcctcgtaccctctttgagggacacctggacccgttttgctatcgcggtaaaggatgac
aaggtcatgttctacctgaactgtgacatagatcctctagtgctgcgcatcgaaaggtcc
cctgatgagatggagttagaagctggcgcgagggtctttgttggacaggctggaggctct
gatccagacaagttcttgggtgtaatgagcgagctgagcgtggtcggagacccccgtgcc
gctgagaggcactgcgaagaggacaacgatgactccgacatggcttcaggagagggaagt
ggcaatgtggaaaccagaccatcaaaaccagccgtagcaaaacacacatggacgacggcc
ccgccatctttgcggcccattcagcagcccccggtggccaggcaagaggagacgtcgact
ttgagacatacagggtcaattggggccaaaggagagaaaggtgaccgaggggagaaaggg
gacagaggtctgacggggccaaaaggagacaccagttacagcactgcagttagctcacag
ggaggagatcgaggagggaagggagaacccggagaaaagggtgcaaagggcaatgcaggt
tttggctaccaaggaaagaagggagaccctggcaccccaggccccccagggcccccagga
ccccctggggtggcatcagaggtatcagtgtgcaaagagggttcagatccttcctgtgta
cctggtgctcgaggaccacctggaccggcaggtgtccctggtgctcagggaccaccagga
gaggacggagaaccgggtgatcctggtgaagatggaaaaaggggtgctgatggacccccg
ggcttcccaggaacccccggcaatcctggactgaaaggagagaagggagatcgtggcgat
ggtcagaatggccccagggggccaccaggtcctcctggacccccaggaccaggaagcaga
tctacttttgtggatatggagggctcaggattccctgatctggaatcagttcggggactg
ccaggaccaccaggcccccctggtctacctggtgttcctggtcttgctacaccaaataca
gcatcgagttctggagcagtgggaccaccgggacacgatggggcgcctggtcaacctggc
ttgtctggtttaccaggtgtcgatggccatccaggaccccctggcactaagggagaaaag
ggtgattctggtgtgcttggtcatccaggaccaggtggagagaagggagctcaaggagat
gctggtttacctggaccaacaggggagcctggattggctggtttaccaggaccaatggga
ccagctgggccaccaggacctcccgggcctcctggaccaagataccatgttggatttgat
gacatggagggatctggtgggattttctctaatggacctcctggtgtcagaggacctgaa
ggaagacagggtccacctggcttgcctggacttccaggtaaaccagggttgcccgccctc
gcaggtcagaagggcagcacgggtcctgaaggacgagatgggcaaccaggactggacggc
ttccctggagttcagggagcaaaaggtgacagaggtgaccaaggagaaaggggggaacca
ggccgagatgcctctggagtccctggaccaccaggcgcacctggaccacctggacaaatc
gtctaccaaccatctgacaattttgacggtgctgttggcagtgttggtcctcagggagga
cctggcatgccgggtcgagctggattccccgggcctatgggtccaaagggtgacagcgga
gaaccaggacctccaggttacggcctcaagggcgagaaaggtgagccaggtctagtcatt
ggtcctgatgggagtccactcttttcagctggtctaacaggttttaaggggaatcgagga
cctcctggacctgttggaccacctggacaatatggacctcctggaattaagggtgaaatt
ggaatgcctggaagacctggtcggcccggtgtaaatggatacaagggggagaaaggagag
ccagcctctggctatggatacccaggagttccaggcccaccaggaccaccaggacctgcg
ggaccagccttagatcgcttctatggctatgatggaacttccagaaactatccagcaatt
aaaggagaaaagggagactatggcgaacgtggccttccaggcgcccctggagtcttcaat
tttgatattcatacattaaagaatgacctaaaaggagagcatggagacccaggagtgaag
ggagaaaagggtgaacctggtggatattatgaccctcgttttggaggacctctcggccca
caagggcctactggcaagacgggcttaacaggtccaaaaggagattctgtaatgggtccc
cctggacctcagggaccacctggcaaaccgggcatcggttacgatggtcgccaaggtcct
cccggaccaccaggacccccaggaccggcaacgtcaccctctctgcctggggccttttgg
cccagtcaaagtgccaatgtaccaggagcacctggtcctcctggcccacctggaagtcct
gggctctcatctggagttgcagttctcaggtcctatgacacaatgcttgctactgccaga
cgccaggcagaaggcagcctcatttacatcatcgacaaagccgacctctatttaagagtc
cgcgatggactgcgacaagtaatgcttggcgagtacagccccttcttcagagatttggaa
aacgaggtggcagaggttcaacctccacctgtgatcttgtacccccagtcccacgaccag
tcccaaaacaatggagccggccactactctcagactgtttcaggcattcgacccatcgag
ccgccgccacacccacctgtggacccccgatacccttcacagtatgatcccagattccca
gaccagaggcactcgggtcagacggatggcagactggcgacagaacaggctgagaacaga
tatcctgtgactccccagcgaagaccgagcccacctgtactgcaacctgcagtgcatggg
gacaaatctgaatcagggctccatctcatcgccctcaatgcccctcaaactggtaacatg
cgaggaattcggggggcagacttcttgtgtttccagcaggcccgtgctgtgggcctgaag
ggcaccttcagagccttcctgtcctcaaagctccaagacctttacaccattgtccgcagg
tcggacagggacacattgcccattgtcaacctcaaggatcaagtgctgtttgacagttgg
gaatcaatctttgatgacaatgccagcagaatgcgaaatagtgtaccaatttactcattc
gatggcagggatattctcagggacagtgcatggccacacaaaatggtctggcatgggtcg
agcaacaaaggccacaggcaaacagaccactactgcgaaacatggcgggcaggcgagcag
gccgtgacgggtctggcgtcagcgatacagagcggccacctcctgcagcaacactcccgc
agttgctccaactcccacattgtcctgtgcatcgagaacgccttcacatcacactccaaa
aaataa
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integrated database retrieval system
