Phyllopteryx taeniolatus (common seadragon): 133487030
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Entry
133487030 CDS
T09737
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133487030 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptao03041
]
133487030 (sf3b1)
03036 Chromosome and associated proteins [BR:
ptao03036
]
133487030 (sf3b1)
Spliceosome [BR:
ptao03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
133487030 (sf3b1)
Complex B
133487030 (sf3b1)
Complex C
U2 SnRNP specific factors
133487030 (sf3b1)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
133487030 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
DUF5870
UNC45-central
GST_N_4
DUF2298
Motif
Other DBs
NCBI-GeneID:
133487030
NCBI-ProteinID:
XP_061648960
LinkDB
All DBs
Position
12:complement(2361865..2386920)
Genome browser
AA seq
1324 aa
AA seq
DB search
MAKIAKTHDDIEAQILEIQGMKATLVEEGDEKGVGLVSTGFYDQEIYGGSDSRFTGYVTS
IAANEQEDDDEEDTATSLLGQKKQGYHAPVAILNAIPQSDEQYDPFAEHRPQKIAEREDE
YKARRMQMIISPERLDPFADGGKTPDPKLQVRSYMDVMREQNLSKEEREIRLQLAEKAKS
GDLKAVNGSAASQAAAAAAAAAAAAKRKRRWDQTADQTPTNSTPKKMSSWDQADASVETP
GHTPAHTPSNSRWDETPGRPKGSETPGATPSSRMWDPTPSHTPAGAATPGRDTPGHATPG
HGGATGSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDE
TPASQMGSSTPLLTPGKTPIGTPAMNMATPTPSHLMSMTPEQLQAWRWEREIDERNRPLT
DDELDAMFPEGYKVLPPPAGYVPIRTPARKLSATPTPIGGMTGFHMQVEDRTTKQMNDQP
SGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQIT
DKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEP
LLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALG
IPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQK
VRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAE
YANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQ
HRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLG
AADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRL
NNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAI
VNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICF
ELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVA
ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
DLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVA
IGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPQVYNDEKNMYTRYEL
DYVL
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgacgatattgaagcccagatcctggagatccagggg
atgaaggccactctggtggaggaaggagacgagaagggagtcggcctcgtttcaactggg
ttttatgaccaggagatctatggaggaagcgacagccgttttaccggctatgtcacttcc
atcgctgccaacgaacaggaagacgacgatgaagaggatacggcgacgagtttgctggga
cagaaaaagcaagggtaccatgctccagtggccattctcaatgccattcctcagtcagat
gaacaatatgatccatttgcggagcatcgtccacagaagatcgcggagcgggaggacgag
tacaaagctcggcgcatgcagatgatcatctcgccggagcgcctcgacccctttgcagat
ggaggcaaaactccggaccccaagctgcaggtcaggtcgtatatggacgtcatgagagag
cagaacctgtccaaggaagagagagagattcgtctgcagctcgcagaaaaggccaagtca
ggcgacctgaaagctgtcaatggctccgctgccagccaagctgccgccgccgccgccgcc
gctgctgctgctgcaaaacgcaagcgccgctgggaccagacagctgaccaaactcctacc
aattctactcccaaaaagatgtccagctgggaccaggctgatgcctcggttgagacccca
ggacacacgccggcgcacacaccttcaaacagccgatgggacgagacccccggccggccc
aaaggcagtgagaccccgggggccacacctagctcacgcatgtgggaccccacacccagc
cacacgccagctggcgcggccacgccaggcagggacacaccaggtcacgccacacccggc
cacggcggagccacgggaagcgtccggaagaaccgctgggatgaaacgccaaagaccgaa
agggagaccccgggacacggcagcggctgggccgaaaccccacgtacagacaggggggat
gagtctgtaggggagacccccactccaggagccagcaagaggaaatctcgctgggatgaa
acacccgcgagccagatgggctcctcaacaccacttctgacccctgggaagacaccaatt
ggaacccccgccatgaacatggccaccccaacacccagtcacctaatgagcatgactcca
gagcagctgcaggcctggaggtgggaacgggaaattgacgagaggaaccggcctctcaca
gatgacgagcttgacgccatgtttccggaaggatacaaggtgttgcctccaccagctggc
tacgtgcctatccgaacaccagcccgtaagctctcagcaacgcctactcccattggcggc
atgactggcttccacatgcaagtggaggaccgcaccaccaaacagatgaatgaccaaccc
tctggaaacctcccgttcctcaaacctgatgacatccagtattttgacaaactgctggtt
gaggtggatgagtccacgttgagcccagaagaacagaaagaaagaaagataatgaagctg
ctgttgaagattaaaaatggaactccacctatgaggaaggcggccctgcgtcagatcaca
gacaaagctcgtgagttcggagcaggacccttgttcaaccagatcctaccactgctcatg
tcccccaccctggaggaccaagagcgccacctgctggtgaaagtcatcgaccgtattctc
tacaaactggatgaccttgttcgaccctacgtacacaagatacttgtggtgatcgagccc
ctgctaattgatgaggactactacgccagagtagaaggcagagagatcatttccaactta
gcaaaggcggctggcttggcaaccatgatctccaccatgcgtcccgacatcgacaacatg
gacgagtacgtgagaaacaccaccgccagggcctttgccgtggttgcgtctgcccttggc
atcccctccctgctgcccttcctcaaagccgtgtgtaaaagcaagaagtcatggcaggcc
cgccacacgggtatcaagattgtacagcagattgccatcctcatgggctgcgccatcctg
cctcacctgcgcagcttggttgagatcattgagcacggtctggttgatgagcagcagaag
gtgaggaccatcagcgccctggccattgccgctctggctgaagctgctacaccctatggt
atcgaatcatttgactcagtgctcaagcctctctggaagggtatcagacagcacagagga
aaaggtttggctgccttcctcaaagctattggctacctgatccctctgatggatgctgag
tacgctaactactacacccgagaggtgatgctaatcctcatccgagagttccagtcccct
gatgaagagatgaaaaaaatcgttctcaaggtggttaagcagtgctgtggcaccgatggt
gtggaggccaactatatcaagactgagatcctgccccccttcttcaagcacttttggcag
cacaggatggctttggaccgacgtaactatagacagttggtggacaccacagtagagctg
gccaacaaggtgggagccgcagaaatcatctctcgcatcgttgatgacctgaaagacgag
gcagagcagtaccgtaaaatggtgatggagaccatcgagaaaattatgggcaacctgggc
gctgccgatatcgaccacaaactggaggagcagttgattgacggcatcctgtacgccttc
caggagcagaccacagaggattctgtgatgctgaacggcttcggcacggtggtgaacgcc
ctcggcaagcgcgttaagccctacttgcctcagatctgcggtacagtgctgtggcgtctc
aacaacaagtcggccaaagtgcgtcagcaggccgccgacctcatctcccgtactgccgtg
gtcatgaagacatgccaggaggagaagctgatgggtcacttgggtgtggtgctgtacgaa
tacctaggagaagaataccctgaagtgctgggtagcatcctgggagcactgaaggccatt
gtaaatgttattggtatgcacaagatgactccccccatcaaagatttgctccctcgtttg
actcccatcttaaagaacagacacgagaaagtgcaggagaattgcatcgatctggtgggc
aggatagcggacaggggtgctgagtacgtgtcagccagagagtggatgaggatttgtttt
gagttgctggaacttctcaaggctcacaaaaaggccatccgcagagccactgtcaacaca
tttggctacattgccaaggcaattggcccacatgacgtcttggctaccttgctcaacaac
ttgaaggtgcaggagcgtcagaaccgcgtctgcaccacggtggccatcgccatcgtggcc
gagacgtgttcaccctttactgtcctgcctgcgctcatgaacgagtaccgcgtgcctgag
ctcaacgtgcagaatggtgtgctcaagtcactgtcattcctttttgagtacattggcgag
atgggcaaagactacatctatgcagtcacgcccctcctggaggacgcgctgatggacaga
gatctagtccacaggcaaactgccagtgccgtggtccagcacatgtccctgggtgtttac
ggttttggctgtgaggactccctcaaccacttgctcaactacgtgtggcccaacgtgttt
gagacgtcgcctcacgtcatccaggctgtcatgggcgcactggagggcctgagggtggcc
atcggtccctgccgcatgctgcagtactgcttacagggtctgttccacccggcacggaag
gtgcgcgacgtctactggaagatttacaattccatctacattggctcacaggatgccctc
atcgcccactatcctcaagtgtacaatgacgagaagaacatgtacacccgctacgagctg
gactacgtcttgtaa
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