Phyllopteryx taeniolatus (common seadragon): 133487399
Help
Entry
133487399 CDS
T09737
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptao03036
]
133487399 (dicer1)
Chromosome and associated proteins [BR:
ptao03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133487399 (dicer1)
microRNA pathway
RISC loading complex
133487399 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
133487399
NCBI-ProteinID:
XP_061649868
LinkDB
All DBs
Position
13:25598740..25864663
Genome browser
AA seq
1872 aa
AA seq
DB search
MAGLKLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQAKLLEAALEHNTIVCLNTDSGK
TFIAVLLTKELSHQIRGQYPGNAKRTVFLVNSALSVVQQAAAVRTHSDLKVGEYTDMEET
SAWTCHQWHEKIINKQVLVMTCHIFLHILRNQILTLSKINLVVFDDCHLAIADHPYCEIM
KLFDGGLCNPRILGLTASILNGKCDPSDLEQKIQNLEQVLKSNAETATDLVVLDRYASLP
REVVLDCGPYLDKSGLSSRLQVELEEALDFLNDCNIAVAKEDRGPTIISCQVLSDCRAVL
QVLGPWCADKAAGIMVRELQKYIKHEQGELNRKFLLFTDTILRKVHALCEEHFSPASLDL
KFVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEEEDEDEEVETKERP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDAELSYISNNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYVMLADSDKTKSFEKDLGTYKAIEKILRNKCSKSVEVGEFEGEQVLDDDNI
LPPYVLQSEEGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTMETQDGRFQSTLYLP
INSPLRVPVKGPKMNCARLAEKAVALLCCEKLHRIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKTIPECLQDSYTVPEHTYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDSTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFNLTATELDLIIRLH
QYIFSHILRLEKPALEFKPTLADSAYCVLPLNVVGDSNTLDMDFKFMEDIEKSEARTGIP
TTHYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTASEAGVGSQILPPDFR
YPNLDFGWKKSIDSKIFTSLSEDNDLQRKHQSPDSISVMDESHLQHSQAIVSYGKNFVNG
TTLIPDNGGISLPEGEHIHLHNCQCSQCQFLELLHPETMQIPTSVPVQPSHSLKNPGTCT
PQHSDECTPERNIGHKNNATSAYGQAEECPSAHKACNLAAVLHPSEVAGDSIKSLGPNPG
LILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCN
LYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQEKTITDKLDSDEAKEELLPNGCSGHD
CGREAEEVTDEGDLLLKDEPKDEVNIEDDLEYYKEHIKFIDNMLLGSGAFGKKISLSSFP
PSLTTASGSSPSMETPYEWKVPKKNPFPSAHHHSETLPTVPSAEDFDYSSWDAMCYLDPT
KAGEEDDFVVGFWNPSEENYGTELGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCG
ERAAQMFLCSLGLKVLPLERGSLTGDFSYGWLKIPPRCMLEHPDAERTLNHLISGFENFE
KKINYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPG
VLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKNEMQGMDSELR
RSEEDEEKEEDIEVPKAMGDIFESLAGGIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVP
RSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALR
SLKANQPQVQNN
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgaagcttgtcaccccggccacatctcccatggggcctttttttgggctt
ccatggcagcaggaggctatccacgataatatctatacacctagaaaatatcaggcaaaa
cttcttgaagcagctcttgaacataatactatcgtctgcttaaatactgactcagggaag
acatttattgcagttctactaacaaaggagctttcccaccaaatccgtggacaataccca
ggaaatgcgaagaggactgtattccttgtcaactcagccttgtctgtggttcagcaagca
gctgcagtcaggactcactctgacctcaaagtgggagagtacacagatatggaggagact
tcagcatggacttgccatcagtggcatgaaaagataatcaataaacaggtgctggtcatg
acttgccatatattcctgcacatactgaggaatcaaatcttaactttgtcgaaaattaac
ctggtggtttttgatgattgtcatcttgccatcgctgatcacccctactgtgagataatg
aagctttttgatggtggcttgtgcaatcctcgcattttgggtctcacagcctccattttg
aatggaaagtgtgacccatcagatcttgagcagaaaatccagaatttggagcaagtcctg
aagagcaacgctgaaactgccactgaccttgtagttcttgacagatatgcctcactgcca
agggaagttgtgctggactgtggcccctatctggataagagtgggctctcctctcgtctc
caagtggagttagaggaagctcttgacttcttgaatgattgtaacatagctgttgcaaaa
gaagacagaggtcccacaatcatttcctgtcaggtcctgagtgactgcagggctgtgctg
caggtgctggggccctggtgtgcagacaaagcagcaggtatcatggtgcgtgagctccag
aagtacatcaagcatgaacagggagagcttaaccgcaagtttctgctgttcaccgacacg
attctcagaaaagtacatgccctttgtgaggaacatttctctcctgcctccctggacctc
aagtttgtcacaccaaaggttctccgcctgttggagatcctgcatgaatacaagcccttt
gaacggcagcagtttgagagtgtagagtggtacaacaaccggaatcaggacaactatgtt
tcttggagtgattctgaagaagaagatgaggatgaagaggtcgagaccaaagagaggcct
gaagccaactttccttcaccattcaccaacattctatgtggaattatctttgtcgagagg
cgttacactgcggtcgtcctaaatcgtcttatcaaagaggcaggaaagcaagacgcagag
ctgtcttacatcagcaataacttcattactggccatagcattggcaagaaccagccacgg
aacaagcagatggaggtggaattcaggaagcaagaggaggttctccgcaaattccgggct
catgaaaccaacctgctgattgccacaagcattgtggaggaaggtgtggacattccaaag
tgtaacttggtagtgcggtttgacttgccaactgaatacaggtcctatgtccagtccaaa
ggccgagctcgagctcctgtctccaactacgttatgctggctgatagtgacaagaccaaa
agctttgaaaaggatcttggtacttacaaggccatagaaaagatattgagaaacaagtgc
tccaaatctgttgaggttggtgagtttgaaggagagcaagtgttggatgatgacaacatc
cttcctccatacgtgcttcaatctgaggaaggaggtccccgggtcaccataaatacagcc
attggacacattaacaggtattgtgctcggctgcccagtgacccctttacccacttggct
cccaagtgtaaaactatggagacgcaagacggaagattccagtctacactttatttaccc
atcaactccccactaagagtgcctgttaagggtccaaaaatgaattgtgccagattggca
gagaaagcagttgcactgctttgttgtgagaaactccatcgaataggtgagctggatgat
catttgatgccagtcgggaaagagaccgtaaagtatgaggaagagctcgaccttcatgat
gaagaggaaaccagcgttcctggccggcctggctcaacaaagaggaggcagtgctatcct
aaaactataccagagtgtttgcaggacagttatactgtacccgagcatacttactaccta
tatgtcattgggatggtcctcaccacgccactcccggatgagctcaactttcgccgacgg
aagctttacccaccagaggatagcacccggtgttttgggatcctgacagcgaaacccata
ccgcgaatcccccattttccggtctacacacgctcgggtgaggtgactatctccattgag
ctacaaaagtctggcttcaacctcaccgccactgagcttgacctcatcattcgcctgcac
cagtacatcttctcccatatcctccgcctagaaaaacctgcactcgaattcaagcctact
cttgctgattctgcttattgtgttctacctctcaatgtagttggagattccaacacgctt
gatatggatttcaagttcatggaggatattgaaaagtctgaggctcgaactggcattccg
acgactcattacaccaaacagaaccccttcaccttcaaattggaggattaccaggatgct
gtcatcattccaaggtaccgtaacttcgaccagccacatcgcttttatgtcgctgatgtg
tacacagacctcacacctcttagcaagtttccttcaccagaatatgagacgttcgctgag
tactacaaaactaagtacaacctggacctgtccaacctgaaccagccactcttggatgtt
gaccatacctcatccagactgaatctcttaacaccccgtcacctgaaccaaaagggcaaa
gcactgcccctcagcagtgcagagaagaggaaagcaaaatgggaaagtctgcagaacaaa
cagatcctggttccagagctttgtgccatacaccccatccctgcatccctttggaggaag
gcagtgtgtttgcccagtatcctctaccgtctccactgcctcttgacagcagaggaactc
agatcccagacagccagtgaagctggagttggatcacaaatccttcctcctgattttagg
tatccaaacttggactttgggtggaagaaatcaattgacagcaaaatattcacgtcctta
agtgaggataatgaccttcaacgtaagcaccagtcacctgattccatttcagtcatggat
gaaagtcatcttcagcattcccaagccattgtcagttatggcaagaactttgtgaatggc
actactctaattcctgacaatggtggcatcagcctcccagaaggagagcacattcaccta
cataactgtcaatgctcccagtgtcaatttcttgaactgcttcaccctgaaacaatgcaa
atccctacctcagttcctgtgcagccctctcacagcttgaagaatcccggcacgtgtact
ccacagcatagtgatgaatgtacaccagaaaggaacataggccacaaaaataatgctacc
tcagcctacggacaggccgaagagtgtcccagtgctcacaaagcatgcaatcttgctgct
gtcctgcatcccagtgaagtggcaggagactcgataaaaagcctgggccccaaccctggc
cttatcctgcaggccttgaccctttccaatgccagtgatggtttcaacctagagcggctg
gaaatgctgggagattcgttcctcaagcatgccatcaccacatatctgttttgcacctac
cctgatgcccatgagggcagactcagctacatgcgcagcaagaaggtgagcaactgtaac
ctgtaccgcttggggaagaagaaaggacttcccagcaggatggtggtgtccatctttgat
ccccccgtcaactggctgcctcctggctatgtcgttaaccaggagaagaccattactgac
aaactggattctgatgaggccaaagaagagcttctgcctaatggatgttctggtcatgac
tgtggtagagaggcggaagaggtcactgatgagggagacctgcttttgaaggatgagcca
aaagatgaggtcaacatagaggatgacctggagtactacaaggaacacatcaaattcatt
gacaatatgctgctaggatctggtgcatttggcaaaaagatctctctgagcagcttccca
ccctctctaaccactgcctcaggctcatcaccatccatggagaccccatatgaatggaag
gtcccaaagaaaaacccatttccctcagcccaccaccactctgagacactacccacagtt
ccttcagctgaggactttgattacagttcatgggatgcaatgtgctacctggaccccacc
aaggcaggtgaagaggatgactttgtggtgggtttttggaatccatcagaggagaactac
ggcactgagcttggaaagcagtcaatctcttacgacttgcacacagagcagtgcattgca
gacaagagcatcgctgactgtgttgaggctctgcttggttgctatctgaccagctgtgga
gagagagctgcccaaatgttcctgtgctcattgggcttgaaggtgttaccacttgagaga
gggagcttgactggtgacttttcctacggctggttgaaaatcccaccacgctgtatgctg
gaacatccagatgcagagcgaacactcaaccaccttatctccggctttgagaattttgaa
aaaaagatcaactacacatttcagaacaaggcttacctactgcaagccttcacccatgct
tcctaccattacaacaccattacagattgttaccaacgattggagtttcttggtgatgca
attctggactacctcattacaaagcacctttatgaagacccacggcagcactcgcctggt
gtactgactgatctgcgctcagcacttgtcaacaacaccatttttgcctctctggccgta
aagtatgactaccacaagtacttcaaagctatctcacctgaacttttccacgttattgat
gactttgtgcagtttcaactggaaaagaatgagatgcaaggcatggactcagagctacga
cgctctgaagaagatgaggagaaagaggaagacattgaagtccccaaggctatgggtgat
atctttgagtcactcgctggaggcatttacatggacagtgggatgtcattggagatggtg
tggcaagtgtattatccaatgatgaggccacttatcgagaaattctctgcaaatgtaccc
cgttctcctgtgagggaattgcttgaaatggaaccagaaactgccaagttcagccccgca
gagagaacttacgacgggaaggtccgggttacagtggaagtcgtaggaaagggcaagttc
aaaggagtcggacggagctaccgtattgccaagtcagcagcggcccgacgagctctgcgc
agcctcaaagccaatcaacctcaggtccaaaacaactga
DBGET
integrated database retrieval system
