Phyllopteryx taeniolatus (common seadragon): 133489080
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Entry
133489080 CDS
T09737
Symbol
lig1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03030
DNA replication
ptao03410
Base excision repair
ptao03420
Nucleotide excision repair
ptao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133489080 (lig1)
03410 Base excision repair
133489080 (lig1)
03420 Nucleotide excision repair
133489080 (lig1)
03430 Mismatch repair
133489080 (lig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptao03032
]
133489080 (lig1)
03400 DNA repair and recombination proteins [BR:
ptao03400
]
133489080 (lig1)
Enzymes [BR:
ptao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
133489080 (lig1)
6.5.1.6 DNA ligase (ATP or NAD+)
133489080 (lig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
133489080 (lig1)
DNA replication proteins [BR:
ptao03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
133489080 (lig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
133489080 (lig1)
DNA repair and recombination proteins [BR:
ptao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
133489080 (lig1)
NER (nucleotide excision repair)
Other NER factors
133489080 (lig1)
MMR (mismatch excision repair)
Other MMR factors
133489080 (lig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RCDG1
Motif
Other DBs
NCBI-GeneID:
133489080
NCBI-ProteinID:
XP_061653778
LinkDB
All DBs
Position
14:complement(2191632..2255556)
Genome browser
AA seq
952 aa
AA seq
DB search
MQRSIASFFQPKTKDKDVQKKASDKQVKKPVKSPLKAQNGVQEEDSPVKKVPKRSRRILD
SDDDDQEVNAAKQQVKDDLFKAVPTLMSPPPPPPAPATPATTASPASSSSVSSSEGISKR
KTEYDAASRDPRDQGEVNIAQITRKMLPKRKLNDGLSGSDSQQEDEATNTQTVAVAKGQR
SKRARVDDVGDDNNTDEVTMQERDEEAEATEQVRMPDKDREKAEEAEKKLEDDEAEEEEK
RDVKEPKEEAKKAPISSFFAPRKATVKTKKKGDGEEKKTTTSSPVEDSKDAKTESPSTET
DYNPSRPNYHPLEEACWEAGQKVPYLAVARTFEKIEEDSGRLRNIETLANLFRSVLLLSP
DDLLCCVYLCLNQLGPAYLGLELGIGETVLMKAVAQATGRQLDKIKAEAQERGDLGLVAE
SSRSNQRTMFRPASLTVDGVFKKLKEIAGMSGNSAMNKKIGIIKGLFVACRFSEARYIVR
SLAGKLRIGLAEQSVLSALSQAVCLTTPKKGTSPAVIDAGKVMTTESRRAWIEEKSLILK
QTYCEMPNYDILIPVLLKEGIDQLPNHCKLTPGVPLRPMLAHPTKGVGEVMKRFDETAFT
CEYKYDGERAQIHILESGEVRIFSRNQEDNTSKYPDIISRIPKVKKDSVVSCVLDSEAVA
WDREKKQIQPFQVLTTRKRKDVDASDIKVQVCVYAFDLLYLNGESLVRQPLCRRRALLRE
SFAEVEGEFLFARYIDSDNTDTIAEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLK
LKKDYLEGVGDTVDLCVIGAYLGKGKRTGTYGGFLLACYDEDNEEFQSVCKIGTGFKDED
LEQHHKFLKEHILPKPRPYYHVAQSAEPDVWLDAVQVWEVKCADLSLSPVYKAAMGMVDP
EKGISLRFPRFLRIRDDKKPEDATSGAQIADLYKKQQQIQNQGDKADMEDYY
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcagcatcgcatccttctttcagcccaagaccaaggacaaggatgttcagaag
aaagccagtgacaagcaagtgaaaaagcctgtgaaaagcccactcaaggcccaaaatgga
gtccaggaggaggactcgcccgtcaagaaggttcccaaacgtagccggcggattttggac
agcgatgacgacgaccaagaagtgaatgccgccaaacaacaagtcaaagatgatttgttc
aaggcggtgcccaccctgatgtctcctccgccgcctcccccggcccccgccacgcctgcc
actaccgcctcgcccgcctcctccagctctgtctcgtcttctgagggcatcagcaaacgc
aagacagagtatgacgccgcgtcacgggacccgagagaccaaggtgaagttaacatcgcg
caaatcacgaggaagatgcttcccaagaggaagctgaatgacggcctcagcggcagcgac
agtcaacaggaggacgaggccaccaacacgcagacggtggcggtggccaagggtcaacgg
agcaagcgagcccgcgtggacgacgttggcgatgacaacaacacagacgaggtcacaatg
caagaaagagacgaggaggcggaagcgacggagcaggtgaggatgccggacaaagaccga
gagaaagcggaggaggcggaaaaaaagcttgaagatgatgaagcggaagaagaggagaag
agggacgtaaaggagccaaaagaggaagccaagaaagctccaatcagcagcttctttgct
cctagaaaggctacagtgaagaccaagaagaagggtgacggagaggagaagaagacaaca
acttcctcacctgtggaggacagcaaagatgcaaaaactgagtcaccgtcgaccgagacg
gactacaacccgtccaggcccaactaccacccgctggaggaagcctgctgggaggcagga
caaaaagtgccttacctggcggtggctcgcacctttgagaagattgaagaggactctggc
agactgaggaacattgaaactctggccaacctgttccgctccgtgctgttgctttctcca
gacgacctgctgtgctgtgtgtacttgtgtttaaaccagctgggacccgcctatcttggc
ctggagcttggcatcggggagacggtgctgatgaaagctgttgcgcaagccacgggacga
cagctggacaagatcaaggcggaggctcaagagcgcggcgacctcggtctggtagccgag
agctcccgaagtaaccagcgcaccatgttcaggccggccagcctgacggtggatggcgtc
ttcaagaagctcaaggagatcgcgggcatgagcggcaactcggccatgaataagaagatc
ggcatcatcaaaggactctttgtggcttgccgtttctcggaggcccgctacatcgtgagg
tcgctagcggggaagctgaggatcggactggcagagcagagcgtcctgtcggcgttgagt
caagctgtgtgcctcacgacgcccaagaagggcacctcccccgccgtgatagatgccggg
aaagtgatgaccaccgagagccgacgtgcttggattgaagagaagagcctcattcttaag
cagacttactgcgagatgcccaactatgacatcctcatccccgtccttctcaaagaaggc
attgaccagctgcccaatcactgcaagctcaccccaggcgtacccctgaggcccatgctg
gcacaccccactaagggtgttggggaggtgatgaaacgcttcgacgagacagcattcacc
tgcgagtacaaatacgacggcgagcgtgcacagattcacatcctggagagcggcgaggtt
cggatattcagtcgcaaccaagaggacaacaccagcaagtaccccgacatcatctctcgt
atccccaaggtgaagaaagactctgtggtctcatgcgtgctggattcggaggcggtagca
tgggaccgcgagaagaagcagatccaacccttccaggtcctcaccactcgtaagaggaag
gacgtggatgcatcagacatcaaagtccaagtatgcgtgtacgcctttgatctcctctac
ctcaatggagagtctctggtgcgacagccgctttgtcggcgtcgggcgctactgcgagag
tcctttgccgaagtggagggggagtttttattcgcccgatatatcgactcggacaacacg
gacaccattgcagaattcttggagcagtctgtccgagactcatgcgaaggcctaatggtg
aagactctggagaaggatgccacctatgaaatcgccaagcgctcccataactggctcaag
ttaaagaaggattacctggagggcgttggtgacacggtggacctgtgcgttatcggcgcc
tacctgggtaaaggcaagaggacggggacgtacggcggcttcctgctggcctgctacgac
gaagacaatgaagagttccagtcggtctgcaagattgggactggcttcaaggatgaagat
ctggagcagcaccacaaattcttgaaggaacacatcctgcccaagccccgcccctactac
cacgtggcccaatcggccgagcccgacgtgtggctggatgccgtgcaggtttgggaggtg
aagtgtgccgacctgtcactgtcgcccgtgtacaaggccgcaatgggaatggtggatcca
gagaagggaatctccctgcgttttcctcgcttccttcgcatccgtgatgacaagaagccc
gaagacgccaccagcggagctcagattgccgacctgtacaagaagcagcagcagatccag
aatcaaggagacaaagccgacatggaggactactattga
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