Phyllopteryx taeniolatus (common seadragon): 133489117
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Entry
133489117 CDS
T09737
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Pathway
ptao03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133489117 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptao03019
]
133489117 (ndc1)
Messenger RNA biogenesis [BR:
ptao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133489117 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
133489117
NCBI-ProteinID:
XP_061653862
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All DBs
Position
14:complement(12289718..12297131)
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AA seq
668 aa
AA seq
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MFSAGQSCWFVRKVICWRAAASIAWTALLLPPTTAVFVILSRFSPLHPIQTLSECVSFMG
SASGIFSFILLCGVTTMVGFLIFEYYTVIPTVACSKIALLGQLLHPRHVANSLLHCVMGI
IVAWCAAVTIGGRYEVLGYPCGLSDGPPQVCLNEYHLILLLAGAFVGFSHTLFGVVHNMN
YVSFHTVQQYKYLRFKGSLPLVVRCSATQALYSIRNYIVAYFFLGYIPREWICKMFNLHV
TSSSHLLDTIGGLLDLSLLYHLWISTTFLLFTWYIALLLFRIFITEDYSFPVQSSFTEDV
HQCLPRVLSDPQPAILKFLALQDLALLSQHSPLRRGEVFSLSQPGGHPHNWNAISKECQS
LLTDLTQRLVAYHDSVATNGRAKSLSSGSELKTSSGSSSVSSGVEDLISPRPTSFLVKTP
GSVFARTAPSPLTAPFTPPHLDSPFASPGLRRLTAPVDQGSPWHGAVQSPHVMRRAPRLW
STSTDSQSNSSPQLCAAPPPTPKQEAPQPSLLAQFLHNRKEQVKIFLSKRVLIAYLFNKL
PEASSEALFADSQAHIWALEGLSYLVQASFSEDHFGVVQTTLPSILSCMLFLQEAVDRHF
KLPHASTKPVRTAGSMGELAYKTLRFALRAALKTAIYRITTTFGDHLNAIDMSAEHRKRL
QHFLHYKE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgcgggtcaaagttgttggtttgttcgcaaggtgatttgttggagagctgca
gccagcatagcctggaccgcattgctgttgccccccaccacagcagtttttgtcatcctc
agcagattcagtcctctccaccccatccagacactatcagaatgtgtgtccttcatggga
agcgccagcggcattttctccttcatcctgctttgcggcgtcaccaccatggtgggcttc
ttgatctttgagtattatacagtcatccccaccgtcgcctgctccaaaatcgccttgttg
ggtcagctgctgcacccgcgtcatgtggccaactccctgctccactgcgtaatgggcatc
atcgtagcctggtgtgccgccgtcaccatcggggggcgctacgaggttctgggctacccg
tgcggcctcagcgacggtccccctcaggtgtgtctgaacgaataccacctcatcctgctg
ctggcgggcgcttttgtgggcttctcccacactctgtttggcgtcgtgcacaacatgaac
tatgtgtcgttccacacggttcagcaatacaagtaccttcgttttaagggatccttgccg
ctggtggtaaggtgcagcgccacccaagcgctttactccatcaggaactacattgtcgcc
tatttctttttgggatacatcccgagagagtggatctgtaaaatgtttaaccttcacgtg
accagttcttcccacctactggacaccatcggtggactactggacttgtccctgctctac
cacctgtggatcagcaccaccttcctcctcttcacctggtacatcgccctgctcctcttc
aggatttttatcactgaggactacagtttcccagtgcagtcatctttcacagaggacgtg
caccagtgtcttcccagagttctgtctgacccacagccggccatattaaaattcctcgcc
ctacaggacttggcactgctttctcagcattcaccgttacgacgcggcgaggtgttcagt
ctgagtcagccaggtggacatcctcacaactggaacgccatcagcaaggagtgtcagtcg
cttctgaccgacctgacccagcgactggtggcgtaccatgacagcgtggccaccaacggc
agggccaagtcgctttcgtcgggaagcgaactgaagacctcgtccggctcatcgtcagtt
tcttctggtgtggaggatctgataagtccaaggcccaccagcttcctggtcaagacgcca
gggtcggtctttgcccggactgcgccgagccccctgactgctcctttcaccccgccacac
ctggacagccctttcgcctcgcccggtctgcggcgtctcactgcgcccgtggaccagggc
tcgccgtggcacggcgccgtgcaaagcccccacgtcatgaggagggcccccaggctgtgg
tccacctccacagattcccagtccaacagcagcccgcagctctgtgccgccccaccgccc
actcccaagcaagaagccccccaacccagtcttttggcccagttcctccataacaggaaa
gaacaggttaagatcttcttgtccaagcgtgtgctgatagcatatttgttcaacaagctt
ccagaagcctccagtgaagcgctctttgccgacagccaggcccacatttgggcgttggaa
ggactgtcctacctggttcaagcctccttctcagaggaccactttggcgtggtgcagacg
acgttacccagcatccttagctgtatgctgttcctgcaagaggcagtggaccgacacttc
aagctgcctcacgcctctactaaacccgtgaggacggcaggcagcatgggcgagctggcc
tacaagacgctgcgcttcgctctcagggccgcgctcaagacagccatatatcgaatcacc
accaccttcggagatcacctgaatgccattgacatgtccgcagagcaccgcaagaggttg
cagcacttcctgcactacaaggagtaa
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