Phyllopteryx taeniolatus (common seadragon): 133490152
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Entry
133490152 CDS
T09737
Symbol
ythdc2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ptao
Phyllopteryx taeniolatus (common seadragon)
Brite
KEGG Orthology (KO) [BR:
ptao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptao03041
]
133490152 (ythdc2)
Enzymes [BR:
ptao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133490152 (ythdc2)
Spliceosome [BR:
ptao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133490152 (ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
R3H
OB_NTP_bind
DEAD
Ank_2
HA2_N
AAA_19
ATPase
Ank
nSTAND3
Ank_5
Ank_4
SRP54
AAA_22
AAA_7
AAA_23
AAA_30
DUF1936
AAA_16
Neprosin_AP
AAA_29
PhoH
Motif
Other DBs
NCBI-GeneID:
133490152
NCBI-ProteinID:
XP_061655818
LinkDB
All DBs
Position
15:complement(22209522..22257006)
Genome browser
AA seq
1385 aa
AA seq
DB search
MPNFRTTSQNPAKTRKKQQSSTSCFKDIHISEEVKIAINLSLERFRYSDEKELEFPSSLF
SNERAFIHRMAQALGYISKSKGKGSNRFLTIRKKNCLDTRQSIMPLTLSQASLHAIRSHL
QKFPITDKEREDFQASSKSKLSVAAQPDNSVDMSRPSGRLDCGITVVPPKRRTSEFDTFR
CSLPVCEHEEEIVRLISENRVVLIVGETGSGKTTQIPQFLLDDCSKKGEGCKMFCTQPRR
LAAITVAERVAAERGEAIGKTVGYHIRLESRVSPKTLLTFCTTGVLLRTLMVGDASLASV
THVIVDEVHERDGLTDFLLTKMLDVLQQLPAIKLILSSASLDVDLFLKYFDAWSCPVIYL
KGRQFEVKQYFLEDVLRFTGFNSKEMGKHKEESQRKEETQNFLTKWSKIGEKTGVEDVQI
THLASSDLLRSSNSLDTGGTIKSLDVKGSEPLEPWLLKEMDTCIANIFISADQEYVVQLF
NLILYENVNVDYMHSEKGVTPLMVTAAQGFLTQMEQLLNMGADINLKASNGWTPLDFAKH
FQQVDAVDLLQSSVAFKRMEDQKESTVVQYASTEDQDLLKLYHHNFDDEFVDLDLIMNLL
HKICLTTSDGAVLIFLPGYDDIVSLRDRILYSDERFSAFSKRYQVFTLHSDMPSIEQKKA
MKNSPLNVRKIILSTNIAETSITINDVVFVIDSGRVKEKSFDTISRISMLKTVWISKASA
LQRRGRAGRCQPGICFHLFSQLRFNNMQEFQVPQLLRMPLQELCLQTKLLTPSPVSEFLS
KAPQPPTAHAIKSAVQILKTIGAMNQNEDLTDLGFHLADLPIEPHLGKMVLCAVVLRCLD
PVLTIACTLGYRDPFVLPAQGSQKRAALQCRKQFSSNTFSDHMTLLRVFQAWQKSRTDGW
ERPFCEKNFLSNATMEMILGMRTQVLGQLRATGFVRVHGDSDIRNVNINSENWAVVKAAL
VAGMYPNLLHINPEANRLSSNKEKKVNFHPASTLNLYQNKEESSSKLSQALPTDWLIYDE
MSRGHGIASVRCCTLVTPVTVAIFAGGYRQLNSAPHEATVQKGSPVDDMSDSETEDSAEI
RIDEWLIFQTNSESAELVFDLRNKWHNLFNKRICLSNTWSQEDEMTIQTFISVLSTEEHG
AGLKQPSGIGQRPWTLMSERFYQNSKGSQKLSCSPTDDRCSRTHGVSGLYRKKPHCSDKS
SLSKKHLMEQQVSTSNSTSSVSLDNQSSSPFASSSGQHCTKQLLPQLASPSIRYFVMKSS
NLRNIDISQQKGIWSTIPSNEPKLTKALQENEIILIFSIQGSGHFQGYARMSSTISHTGC
QDWGFGGLGGVFSVEWICKESLPFQCTQHILNPLNDNKKVQISRDGQELAGQAGRLLLAL
WERNT
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatttccgtacaacttcgcaaaacccggccaagacccggaaaaaacaacagtct
tctaccagttgcttcaaagacattcacataagtgaagaagtcaaaattgctattaacctt
tccctggagaggtttcgttacagtgacgagaaagagctggaatttccctcttcgcttttc
tctaatgagagggccttcattcaccgtatggcacaggctctgggttacatttctaaaagc
aaagggaaaggatcaaatcgcttcctcaccatcaggaaaaagaattgtctcgacactcgt
cagtctatcatgcccctgacactctcccaagcctctttacatgccatccgcagccatctt
cagaagtttcctattaccgataaagagcgtgaagacttccaagccagcagcaaaagcaag
ctgtctgtggcagcacaacctgacaacagcgttgacatgagcaggccaagtgggcgcttg
gactgtggcattactgtggtacccccgaaaaggcggacatcagagtttgacactttccga
tgctcgctgcctgtatgtgaacatgaagaagagatagtcagactgattagcgagaacagg
gtggtactcatcgttggagagactggttctggaaaaacaacccagattccacagtttctg
ctggatgactgcagcaagaaaggagagggctgcaaaatgttctgtactcagcccagacgc
ctggctgccatcactgtcgctgagagagtggcagctgagaggggagaggcaatcggcaag
actgtcggctatcacattagactagagagcagggtttctccaaagacgctgctaaccttc
tgtaccactggagttttactcaggacattgatggttggagatgccagtctggcatctgtc
acacatgtcattgtggatgaagtgcatgagcgtgatggtcttactgactttctgctcacg
aagatgcttgatgtactgcagcaattacctgcaataaaactgattctctccagtgcatct
ctggatgtagatttgttcctcaagtacttcgacgcttggtcctgtcctgttatttatctc
aaaggaagacagtttgaagtgaaacaatattttctggaggatgttctaagattcacaggt
tttaacagtaaggaaatgggaaaacacaaggaagaatcccagagaaaggaggagacgcag
aactttttgacaaagtggagtaaaataggggagaaaactggtgttgaagatgtacagatt
acacacctggcatcctctgacttactcaggagcagcaattctctggatacagggggcacc
atcaagtcactggatgtcaaaggctccgagccgttggagccatggctactgaaagagatg
gatacctgcatagctaacatttttatcagtgcagaccaggaatatgttgttcagctcttc
aacctcattctctatgaaaatgttaatgttgactacatgcacagcgagaaaggggtcacg
cctttgatggtgacagcagcgcaagggttcctcactcagatggagcagttgcttaacatg
ggggcggacatcaacctgaaggcatccaatggatggactcccttggactttgcaaaacac
tttcagcaggtagatgctgttgatcttcttcagtcttcagttgcctttaaaaggatggaa
gaccagaaagagtccactgtggttcagtatgccagcaccgaagaccaggacctgctcaag
ctgtaccaccacaactttgatgatgagtttgtggacctagatctcatcatgaacctgctg
cacaagatctgcttaactacaagtgatggtgcagtgctaatttttcttcctggatatgat
gacattgtgtcactcagggaccgtatcctctacagtgatgagaggttttctgccttttcc
aaaaggtaccaggtgttcacgcttcattcggacatgccaagtatcgaacagaaaaaagcc
atgaagaattcgccactgaatgttagaaagattattctttcaactaacattgctgagaca
agcatcaccatcaatgatgttgtttttgtgattgattctggaagagtcaaagagaaatcc
tttgataccatcagtcgcatctcaatgctaaagacggtctggatttcaaaagccagtgct
cttcaacgaagaggaagagcgggacgctgccaaccagggatttgcttccacctcttcagt
caactaaggttcaacaatatgcaagagttccaggttccacagctgctacgaatgccgttg
caggaattatgtctgcagaccaaactgctgactccctctccagtatccgaattcttgtcc
aaggctccccaacctcctactgcacacgctataaagagtgcagtgcagatccttaagaca
ataggtgctatgaaccagaatgaagacctgactgatcttggcttccatctggctgaccta
cctattgagccccatctgggaaagatggtgctatgtgctgtggtgctgagatgtctggac
cccgttttgacaattgcctgtacactaggttatcgcgacccttttgttcttcctgcccag
ggctctcagaagagagctgcccttcagtgccgtaaacaattctcatccaacaccttcagt
gaccacatgaccctgctgagggttttccaggcatggcagaagtcacgcactgatggttgg
gagcggcccttctgtgaaaagaactttctgtccaatgccaccatggagatgattcttggc
atgagaacacaggtgctgggacagcttcgtgcgactggctttgtgagggtccatggcgat
agcgacatacgtaatgtgaacatcaactccgaaaactgggcagtggtgaaggcagccctg
gttgctggcatgtatccaaatctgcttcatattaaccctgaggcaaaccggctctctagt
aataaggagaagaaagtcaattttcatcctgcttccacattgaatctgtaccagaacaag
gaggagagttcatctaaattatcacaggctcttcctactgactggttgatctatgatgag
atgagcagaggccatggaattgccagtgttcgctgttgcactttggtgacaccagtcact
gtagccatatttgcaggcgggtacagacagctcaactctgccccgcacgaagcgactgtt
caaaaagggagtccagtggatgacatgagtgacagtgagacagaggactccgctgaaata
cgaattgatgagtggctcattttccagacaaacagtgagtcagcagaattggtgtttgac
ctgaggaacaagtggcataatctgttcaacaagagaatctgtctgtccaatacctggtct
caagaagatgagatgaccattcaaaccttcatttccgtgcttagcacagaggagcatgga
gcaggcttgaagcagccctcagggataggccagcgtccctggactttgatgtcagagagg
ttctaccagaactcaaaaggcagccaaaagctttcctgcagccccaccgatgacagatgc
tccaggacacatggagtttcaggcctgtatcggaagaaaccacattgcagtgataagtct
tcgctgagcaaaaaacatctcatggagcaacaagtctccacaagcaattccacctcttct
gtgagcttggacaatcagtcgagcagcccattcgcttcttcctcaggacagcattgcacg
aaacaattgttaccccagctggcctctccctcaatccgttacttcgtcatgaaaagcagc
aacctgaggaacatagacatttctcagcagaaaggcatctggtccaccattccaagcaat
gagcccaaactcaccaaggccctccaggagaatgaaatcatcctcatcttttctattcaa
ggttcgggacacttccagggatatgctcgcatgtcatcgaccatcagtcatacgggttgt
caagattggggtttcgggggattaggaggagttttcagtgtggagtggatctgcaaggaa
agtttacctttccagtgcacccaacatatcctcaacccattgaacgacaacaagaaggtc
caaataagcagagatggacaagagttagctggccaggcaggcagactgctgctggctctt
tgggagagaaacacctga
DBGET
integrated database retrieval system
