Pseudolabrys taiwanensis: DW352_05365
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Entry
DW352_05365 CDS
T10934
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ptaw Pseudolabrys taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptaw03009
]
DW352_05365
Enzymes [BR:
ptaw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DW352_05365
Ribosome biogenesis [BR:
ptaw03009
]
Prokaryotic type
ribosomal protein modification factors
DW352_05365
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
NTPase_1
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXK79998
UniProt:
A0A345ZSV1
LinkDB
All DBs
Position
1123415..1124758
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AA seq
447 aa
AA seq
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MLDPDKNTDTAAPKVSFVSLGCPKALVDSERIITRLRAEGYELTRQHQGSDLVIVNTCGF
LDSAKAESLGAIGAALKENGKVIVTGCMGAEPENITAAYPDVLAITGPQAYESVLAAVHK
AVPPKHDPFIDLVPPEGIKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAADVLR
EAEKLVNAGVKELLVISQDTSAYGVDLKYAASQWRDRDVRAKFIDLSRALGELGVWVRLH
YVYPYPHVDEVIELMADKKVLPYLDIPFQHASPDVLKRMKRPAAEQKTLDRITRWREICP
DLTLRSTFIVGFPGETEQDFEYLLQWLDEAALDRVGCFKYEPVKGAPANDLAEAVPEEVK
EERWHRFMQAQQKISARRLKRKVGTRQQVIIDEVGPTVSKGRSMADAPEIDGAVYIASRR
PLRVGEIATVKIERADAYDLHGTVVGF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcccgacaaaaataccgacaccgccgcccccaaggtgagcttcgtttcgctc
ggctgcccgaaggcgctggtcgattcggagcgcatcatcacgcgcctgcgcgcggagggt
tatgagctcacgcgccagcaccagggctccgatctcgtcatcgtcaacacctgcggtttt
ctcgacagtgccaaggccgagtcgctcggtgccatcggcgcggcgctgaaggagaacggc
aaggtcatcgtcaccggctgcatgggcgccgaaccggagaacatcacggcggcctatccc
gacgtgctggcgatcaccgggccgcaggcctacgagagcgtgctcgcggccgtgcacaaa
gccgtgccgcccaagcacgatcccttcatcgacctggtgccgccggaaggcatcaagctg
acgccacggcactacgcctatttgaagatttccgaaggctgcaacaaccgctgctccttc
tgcatcattccgaagctgcgcggcgatctcgtgtcgcgccccgccgccgacgtgctgcgc
gaagccgagaagctggtgaacgccggcgtcaaagagctgctggtgatctcacaggacacc
tcggcctacggcgtcgatctcaaatacgccgccagccagtggcgcgaccgggacgtgcgc
gccaaattcatcgatctttcgcgcgcgctcggcgaactcggcgtttgggtgcggctgcac
tacgtttatccctacccgcatgtcgacgaggtcatcgaactgatggccgacaagaaggtg
ctgccttatctcgacatcccgttccagcatgcgtcgcccgatgtgttgaagcgcatgaag
cgccccgccgccgagcagaagacgctcgatcgcattacgcgctggcgcgagatctgtccg
gacctgacgttgcgctcgaccttcatcgtcggtttccccggcgagaccgagcaggatttc
gagtacctgctgcaatggctcgacgaagccgcgctcgatcgcgtgggctgcttcaagtac
gaaccggtcaagggcgcgccggccaacgatctggcggaagcggtgccggaagaggtcaag
gaagagcgctggcatcgcttcatgcaggcgcagcagaagatctcggcgcggcgcctcaag
cgcaaggtcggcacacgccagcaggtcatcatcgacgaagttggcccgaccgtatcgaaa
ggccgctcgatggccgacgcgccggagatcgatggcgccgtctatatcgcgagccgccgg
ccgttgcgtgtcggtgaaatcgcgaccgtgaagatcgagcgcgccgacgcctacgacctg
cacggcaccgtcgtcggcttctaa
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