Pseudolabrys taiwanensis: DW352_12440
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Entry
DW352_12440 CDS
T10934
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ptaw Pseudolabrys taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptaw03021
]
DW352_12440 (rpoH)
Transcription machinery [BR:
ptaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DW352_12440 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_11
Sigma70_r4_2
KORA
GntR
HTH_7
LysM
NirdL-like_HTH
HTH_Crp_2
UCR_14kD
HTH_28
CFAP54_N
Motif
Other DBs
NCBI-ProteinID:
AXK81251
UniProt:
A0A345ZWF4
LinkDB
All DBs
Position
2597627..2598544
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AA seq
305 aa
AA seq
DB search
MARTAVMPALKAESGLSHYLEEIRRFPMLEPQQEYMLAKSWREHGDTDAAHKLVTSHLRL
VAKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPEKGFRLATYAMWWIKAAIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSKISALEEGDLRPDQVQIIAKRLGVTEQDVIDMNRRL
GGDASLNAPIRDDGESGEWQDWLVDDAPTQERILADSEESENRHKALLGALDVLNDRERR
IFEARRLADDPITLEDLAAEFGVSRERVRQIEVRAFEKVQKAVKNRMASLEQPPQQAPQP
ALAAH
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtacagccgtaatgccggcactcaaggccgagtccggtctttctcactatctt
gaagaaatccgccggttcccgatgctggaaccgcagcaggaatacatgctggccaagagc
tggcgcgagcacggcgacaccgacgccgcgcataagctcgtcaccagccatctccggctg
gtcgccaagatcgccatgggttatcgcggctacggcctgccgatctccgaggtcatctcg
gaaggcaatgtcggcctgatgcaggcggtgaagcgcttcgagccggaaaagggtttccgg
ctggcgacctatgccatgtggtggatcaaggccgcgatccaggaatacatcctgcgctcg
tggtcgctggtgaagatgggcaccaccgccaaccagaagaagctgttcttcaacctgcgc
aaggccaagagcaagatctccgccctcgaggaaggcgatctgcggcccgatcaggtgcag
atcatcgccaagcgtctcggcgtgaccgagcaggacgtcatcgacatgaaccgccgtctc
ggcggcgatgcgtcgctcaatgcgccgatccgtgacgacggtgagtccggcgaatggcag
gactggctggtcgacgatgcaccgacccaggagcgcatcctcgccgacagcgaggaaagc
gagaaccgccacaaggcgttgctcggcgcgctcgacgtgctcaacgatcgcgaacgccgc
atcttcgaggcgcggcgtctggcggacgatccgatcacgttggaagacctggccgccgag
ttcggcgtctcgcgcgaacgcgtgcgccagatcgaggtgcgggccttcgagaaggtgcag
aaggcggtgaagaaccgcatggcatcgctggagcagccgccgcagcaggccccgcagcct
gcgctcgccgcgcactaa
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