Pseudolabrys taiwanensis: DW352_17665
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Entry
DW352_17665 CDS
T10934
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptaw Pseudolabrys taiwanensis
Pathway
ptaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DW352_17665 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptaw03019
]
DW352_17665 (pnp)
03016 Transfer RNA biogenesis [BR:
ptaw03016
]
DW352_17665 (pnp)
Enzymes [BR:
ptaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DW352_17665 (pnp)
Messenger RNA biogenesis [BR:
ptaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DW352_17665 (pnp)
Transfer RNA biogenesis [BR:
ptaw03016
]
Prokaryotic type
tRNA degradation factors
DW352_17665 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
Tricorn_2nd
Motif
Other DBs
NCBI-ProteinID:
AXK82193
UniProt:
A0A345ZZ46
LinkDB
All DBs
Position
3721368..3723518
Genome browser
AA seq
716 aa
AA seq
DB search
MFNIHRVELDWGGRKLTLETGHMARQADGAVLATYGETTVLATVVAAKAPREGIDFLPLT
VDYQEKFYAAGRIPGGYFKREGRPTEKETLVSRLIDRPVRPLFADGWRCETQVIVTTLSH
DLENDPDILAMVASSAALTLSGAPFMGPIGAARVGFINGEYVLNPQLDEMTESQLDLVVA
GTTDAVLMVESEAKELSEEIMLGAVMFGHRHFQPVIEAIIKLAEKAAKEPRELTLPDNAA
LEKEILGIAEKDLRAAYSIPVKQDRYKAVGAVKEKVMAHFFPEGAEPAYDKQRVAGVFKE
LEAKIVRWNVLDTSKRIDGRDLKTVRPIQVEVGVLPRTHGSALFTRGETQALVVTTLGTA
EDEQWIDALQGTYKESFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPGKD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPLKRPTAGIAMGLILEGQRYAVLS
DILGDEDHLGDMDFKVAGTEQGVTSLQMDIKIAGITEEIMKVALAQAKDGRVHILGEMSK
ALSAARAELGEHAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKINIEDDGSVKVAS
ASGDSIKAAINWIKSIASDPEVGHIYEGTVVKVMDFGAFVNFFGARDGLVHISQLAASRV
QKTSDVVKEGDKVKVKLLGMDERGKVRLSMKAVDQATGEDLEAKQKADAPAEGAAE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatattcaccgcgttgagctcgactggggcggccgcaagctgaccctcgagacc
ggccacatggcgcgtcaagccgacggcgccgttcttgccacttacggcgaaaccaccgtt
ctcgccaccgtcgtcgccgccaaggcgccgcgcgaaggtatcgacttcctgccgctcacc
gtcgactaccaggaaaaattctacgccgccggccgcattccgggcggctacttcaagcgt
gaaggccgtccgaccgagaaggagacgctggtctcccgcctcatcgaccgtccggtgcgt
ccgctgttcgccgatggctggcgctgcgagacgcaggtgatcgtcaccacgctgtcgcac
gacctcgaaaacgatcccgacatcctggcgatggtggcctcctcggccgcgctgaccctg
tcgggcgcaccgttcatgggcccgatcggcgccgcccgcgtcggcttcatcaacggcgaa
tacgtgctcaacccgcagctcgacgagatgaccgagagccagctcgatctcgtcgtcgcc
ggcaccaccgacgccgtgctgatggtcgaatcggaagccaaggagctgtccgaggagatc
atgctcggcgccgtgatgttcggccaccgccacttccagccggtgatcgaggcgatcatc
aagctcgccgagaaggccgccaaggagccgcgcgagctgacgttgcccgacaacgccgcg
ctcgaaaaggaaatcctcggcatcgccgagaaggatctgcgcgccgcctattcgatcccc
gtgaagcaggaccgctacaaggcggtcggcgcggtgaaggaaaaggtgatggcgcacttc
ttcccggaaggcgccgagcccgcttacgacaagcagcgcgtcgccggcgtgttcaaggag
cttgaggccaagatcgtccgctggaacgtgctcgacaccagcaagcgcatcgacggccgc
gacctcaagaccgtgcgcccgatccaggtggaagtcggcgtgctgccgcgcacccacggc
tcggcgctgttcacccgcggtgagacccaggcgctcgtcgtcacgacgctcggcaccgcg
gaagacgaacagtggatcgacgccttgcagggcacctacaaggaatcgttcctgctgcac
tacaacttcccgccctactcggtcggtgagacgggccgcctcggcggcaccaagcgccgc
gaaatcggccacggcaagctcgcctggcgcgcgatccatccggtgctgccgggcaaggac
gagttcccctacaccatccgcgtggtgtcggagatcaccgaatcgaacggctcgtcgtcg
atggcctccgtctgcggcgcttcgctggcgctgatggatgcgggcgtgccgctgaagcgt
ccgaccgccggcatcgccatgggcctcatcctcgagggccagcgctacgccgtgctgtcc
gacatcctcggcgacgaggaccacctcggcgacatggacttcaaggtggcgggcaccgag
caaggcgtcacgtcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgccctcgcccaggcgaaggacggccgcgtgcacatcctcggtgaaatgtcgaag
gcgctctcggccgcgcgcgccgagctcggcgagcatgcgccgcgcatcgagaccttcaag
atcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgcgagatc
gtcgagaagaccggcgccaagatcaacattgaggacgacggctcggtgaaggtcgcctcc
gcttcgggcgactcgatcaaggcggcgatcaactggatcaagtcgatcgcctccgatccg
gaagtcggccacatctacgaaggcaccgtcgtgaaggtgatggacttcggcgccttcgtg
aacttcttcggcgcccgcgacggcctggtgcacatcagccagctcgccgcgagccgcgtg
cagaagacctccgacgtcgtcaaggaaggcgacaaggtgaaggtgaagctcctcggcatg
gacgagcgcggcaaggtgcgcctgtcgatgaaggccgtcgaccaggcgaccggcgaggac
ctcgaagccaagcagaaggccgacgctccggccgaaggcgcggcggagtaa
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