Pseudolabrys taiwanensis: DW352_18210
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Entry
DW352_18210 CDS
T10934
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ptaw Pseudolabrys taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptaw03032
]
DW352_18210
03400 DNA repair and recombination proteins [BR:
ptaw03400
]
DW352_18210
Enzymes [BR:
ptaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DW352_18210
DNA replication proteins [BR:
ptaw03032
]
Prokaryotic type
DNA Topoisomerases
DW352_18210
DNA repair and recombination proteins [BR:
ptaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DW352_18210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Diphtheria_R
Motif
Other DBs
NCBI-ProteinID:
AXK82286
UniProt:
A0A345ZZD9
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All DBs
Position
3833601..3834695
Genome browser
AA seq
364 aa
AA seq
DB search
MEPAAGNCIPPNAMHQNARTTSRDNVFMRSLGLRYATVEELTIRRRRNGTGFVYVNGRGR
RLRDERTIYRLKRLAVPPAYEDVVYADDPHAHLQARGRDSAGRAQYRYHPDWEKVRELRK
ARRLAKLAVLLPKVRSWVARQLRGVEPTKDFAVASVIALVAATALRPGSEAYVQQHGTRG
AATLLKSNMSIRGATIVLRFRGKGGKAIEKTVESRPLARALKLLCAVPGKRLFQYRAEDG
VVRHLRRRDINIALRAITKQPITLKDFRTLNGSAIALQELAAIEAKSSIRGRRRQILATM
RCVAAELANTPSVCRKSYVHAAVVEAFESGMLHALARKHAGLRAPRLREKLLMEVLATTD
HLRG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggcggcggggaactgcattcctccgaatgccatgcatcaaaacgcccggaca
acctctcgcgataacgtcttcatgcgctcactgggcctgcggtacgcgacggtcgaggaa
ctgacgatccggcgccgccgcaacggcacaggtttcgtctatgtcaacggtcggggccgt
cggctgcgcgacgaacggacgatctatcgtctaaagcggctcgccgttccgccggcgtat
gaagacgtcgtctacgccgacgatccacacgcacacctgcaggcccgcggccgcgatagc
gctgggcgcgcgcagtatcgctaccatcccgattgggaaaaggtccgggagttgcgcaag
gcgcggcggctggccaagcttgccgtgctgctgccgaaggtgcgttcctgggtcgcgcga
caactccgcggcgtcgagcccacgaaggactttgcggtcgcatccgtcatcgcacttgtc
gccgcaacggccctgcggccaggcagcgaagcttacgtccaacagcatggcacacgcggc
gccgcgactctgctcaagtccaacatgtcgatcagaggggcgaccattgtcctgcgcttt
cggggcaagggcggcaaggccatcgagaaaacggtggagtcgcgcccgctcgcgcgggcc
ctcaagctcctttgcgcggttcctggcaagcggttgtttcaatatcgcgccgaggacggt
gttgttcgtcatctgcggcggcgcgacatcaacattgccctgcgggcgatcacgaaacag
cccataaccctcaaggactttcggacattgaacggctcagccatcgccttgcaagagctg
gccgcgatcgaggccaaaagcagcatccgaggacgtcggcgtcagattctggccaccatg
cgatgtgtcgctgccgaactcgccaatacgccgtcggtctgtcgcaagagttacgtgcac
gccgcggtcgttgaggctttcgagtccggtatgttgcacgccttggcgcgcaagcacgcc
ggcctgcgcgcgccacgcctgcgcgaaaagctgttgatggaggtcctcgcgacgaccgac
cacttgcgcggatga
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