Pseudolabrys taiwanensis: DW352_21205
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Entry
DW352_21205 CDS
T10934
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ptaw Pseudolabrys taiwanensis
Brite
KEGG Orthology (KO) [BR:
ptaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptaw03016
]
DW352_21205
Enzymes [BR:
ptaw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DW352_21205
Transfer RNA biogenesis [BR:
ptaw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DW352_21205
Prokaryotic type
DW352_21205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AXK82817
UniProt:
A0A346A0X0
LinkDB
All DBs
Position
4454809..4455549
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AA seq
246 aa
AA seq
DB search
MARYKLIIEYDGAPFRGWQIQADQVSVQGALTAAVERLTGEKVLVQGAGRTDAGVHARGQ
VAHVDLAREWPTDTVRDALNAHLRPDPVAVLSAERVGDDFNARMSAVKRHYLYRIINRRA
DLTLDAGHAWRIPRPLDVDAMHEAAQRLVGKHDFTTFRSTECQAKSPVKTLDELNVVRDG
EHVHVITSARSFLHNQVRSMVGSLAAVGDGKWTADDLSAALAARDRTACGQVAPPDGLYL
MRVDYP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgctacaagttgatcatcgaatatgatggcgcgcccttccgcggttggcagatc
caggccgaccaggtgtcggtgcagggcgcgctgacggcggcggtcgagcggctcaccggc
gagaaagtgttggtgcaaggcgcgggccgcaccgatgccggcgtgcatgcgcgcgggcag
gtggcgcatgtcgatctggcgcgcgagtggccgaccgatacggtgcgcgatgcactcaat
gcgcacctgcggccagatccggtggcggtgttgtcggccgaacgtgtcggtgacgatttc
aacgcgcgtatgtcggccgtgaagcggcactatctctatcgcatcatcaatcgccgcgcc
gatctcacgctcgatgccggccatgcctggcggattccgcgcccgctcgatgtcgatgcc
atgcacgaggcggcgcagcggctggtgggcaagcacgacttcacgacctttcgctcgacc
gaatgccaggccaagtcgccggtgaagacgctcgacgagcttaatgtcgtgcgtgacggc
gagcacgtgcacgtcatcacctcggcgcgctcgttcctgcacaaccaggtgcgctcgatg
gtcggttcgctggcggccgtcggcgacggcaaatggacggctgatgatctgtccgccgcg
ctcgccgcccgtgatcgcaccgcctgcggccaagtggcgccgcccgacggcctttatctg
atgagggtcgactatccctag
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