KEGG   Pseudolabrys taiwanensis: DW352_24820
Entry
DW352_24820       CDS       T10934                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
ptaw  Pseudolabrys taiwanensis
Pathway
ptaw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptaw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DW352_24820 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptaw03019]
    DW352_24820 (groL)
   03110 Chaperones and folding catalysts [BR:ptaw03110]
    DW352_24820 (groL)
   03029 Mitochondrial biogenesis [BR:ptaw03029]
    DW352_24820 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptaw04147]
    DW352_24820 (groL)
Enzymes [BR:ptaw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     DW352_24820 (groL)
Messenger RNA biogenesis [BR:ptaw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     DW352_24820 (groL)
Chaperones and folding catalysts [BR:ptaw03110]
 Heat shock proteins
  HSP60 / Chaperonin
   DW352_24820 (groL)
Mitochondrial biogenesis [BR:ptaw03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    DW352_24820 (groL)
Exosome [BR:ptaw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   DW352_24820 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   DW352_24820 (groL)
  Exosomal proteins of breast cancer cells
   DW352_24820 (groL)
  Exosomal proteins of colorectal cancer cells
   DW352_24820 (groL)
  Exosomal proteins of bladder cancer cells
   DW352_24820 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 KH_PARP14_2 CbiA
Other DBs
NCBI-ProteinID: AXK83465
UniProt: A0A346A2R8
LinkDB
Position
complement(5209073..5210716)
AA seq 547 aa
MAAKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGI
DIATAAVIKDIEKRAKKVSSSAEVAQVGTVSANGDTQIGKMIAQAMQKVGNEGVITVEEA
KAMETEVDIVEGMQFDRGYISPYFVTNAEKMLAELEDAYILLHEKKLSGLQSMLPVLEAV
VQSGKPLIIIAEDVEGEAIATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDLAILTGGQL
ISEDLGIKLENVTLQMLGRAKKVVIEKEKTTIVNGAGKKADIEARVQQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKEKKDRVEDALNATRAAVEEGIVPGGGTALL
RAKKAVGKLSNDNSDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKDETFGFD
AQNEEYVDMVAKGIIDPAKVVRTALQDASSVASLLITTEAMVAELPKEAAPAMPAGGGMG
GMGGMGF
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggctgccaaggacgtcaaattttccggcgacgcgcgcgaccgcatgctgcgcggcgtc
gacattctcgccaacgcggtgaaggtcacgctgggcccgaagggccgcaacgtcgtcatc
gacaagagcttcggcgcgccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgaggacaagttcgagaacatgggcgcgcagatggtgcgtgaggtcgcgtccaag
accaacgacatcgccggcgacggcaccaccaccgccaccgtgctcgcccaggccatcgtg
cgcgaaggcgccaagtcggtcgcggccggcatgaacccgatggacctcaagcgcggcatc
gacatcgcgaccgccgcggtgatcaaggacatcgaaaagcgcgccaagaaggtctcctcg
tcggctgaagtcgcgcaggtcggcaccgtgtcggccaacggcgacacccaaatcggcaag
atgatcgcccaggcgatgcagaaggtcggcaacgagggcgtgatcacggtcgaggaagcc
aaggcgatggagaccgaggtcgacatcgtggaaggcatgcagttcgaccgcggctacatc
tccccctacttcgtcaccaacgccgagaagatgctggccgagctcgaggacgcctacatc
ctcctgcacgaaaagaagctctcgggcctgcagtcgatgctgccggtgctcgaggccgtc
gttcagtcgggcaagccgctgatcatcatcgccgaggacgtcgagggcgaagccatcgcg
acgctcgtcgtcaacaagctgcgcggcggcctcaaggtcgcggccgtcaaggcgcctggc
ttcggcgatcgccgtaaggccatgctcgaggacctcgcaatcctcaccggcggtcagctg
atctcggaagatctcggcatcaagctcgagaacgtgacgctgcagatgctcggccgcgcc
aagaaggtcgtgatcgagaaggaaaagaccacgatcgtcaacggcgccggcaagaaggcc
gacatcgaagcgcgcgtgcagcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgtgagaagctgcaggagcgtctcgccaagctcgcgggcggcgtggccgttatcaag
gtcggcggcgccaccgaagtcgaggtgaaggagaagaaggaccgcgtcgaggacgcgctg
aacgccacccgcgctgcggtggaagaaggcatcgtccccggcggcggcaccgccctgctc
cgcgccaagaaggcggtcggcaagctctcgaacgacaactcggacgttcaggccggcatc
aacatcgtgctcaaggcgctggaagccccgatccgtcagatcgcggaaaacgccggcgtc
gaaggctcgatcgtggtcggcaagatcctcgagaacaaggacgagacgttcggcttcgac
gcgcagaacgaagagtacgtcgacatggtcgccaagggcatcatcgacccggccaaggtc
gtgcgcacggcgctgcaggatgcgagctcggtcgcgagcctcctgatcaccaccgaagcg
atggtcgccgagctgccgaaggaagcggctccggccatgcccgccggcggcggcatgggt
ggcatgggcggcatgggcttctaa

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