Parageobacillus toebii NBRC 107807: DER53_01025
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Entry
DER53_01025 CDS
T06505
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DER53_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptb03400
]
DER53_01025
DNA repair and recombination proteins [BR:
ptb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DER53_01025
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Mitofilin
FapA
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QIQ31629
LinkDB
All DBs
Position
complement(200001..202355)
Genome browser
AA seq
784 aa
AA seq
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MHTRVLHVLEFDKVKEQLLEHVSSSLGKEKVEKLFPSSHFAEVTNWQEETDEAVAALRLR
GHVPLGGIFDIRASLKRAKIGGTLSPHELLDIASTISASRQLKQFIESLHEEKEEFPHLA
GYAEKLAALPEVQQAIERCIDDHGEVMDHASERLRSIRQQLRTTEARVREKLENIIRSQS
AQKMLSDAIITIRNDRYVIPVKQEYRGVYGGIVHDQSASGATLFIEPQAVVELNNQLQEA
RVKEKREIERILTELTSIVAEHAEALLENVDILAQLDFIFAKAKYANKLKATKPVMNDRG
YIRLLQARHPLIDQDVVVPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTLMAQAGLF
IPALDGSELAVFRSVYADIGDEQSIEQSLSTFSSHMVNIVDILRNVDHESLVLFDELGAG
TDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTETLRPTYK
LLIGIPGRSNAFEISKRLGLDERIIERAKSHISAESNKVENMIASLEQSKKRAEEEEKKA
KEARMEAEKLRSDWEQKWEELHEKRDEIIEEAKRKAADIVRASQQEAERIIRELRRMQKE
KQAEIKEHELIEAKKRLEEAIPTLEKKKKERKKQTQHAFQPGDEVKVTSLNQKGYLVEKV
SDDEWQVQLGILKMKINERDLEYIGSAPKTETKPLATVKGKDYHVGLELDLRGERYEDAI
VRLEKYIDDALLAGYPRVSIIHGKGTGALRKGVQEFLKKHRSVKNFHFGEANEGGTGVTI
VELK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgcatacaagagtgcttcacgtattagaatttgataaagtaaaagagcagttattagaa
catgtatcttcgtcattaggaaaagaaaaggtagaaaaactatttccttcttcgcatttt
gccgaggtcacaaactggcaagaagaaacagacgaggcggtagccgcgcttcgtctgcgc
gggcacgttccgctcggcggcatttttgacatccgcgcaagcctcaagcgtgcgaaaatc
ggcggaacgcttagtccgcatgagcttttagatattgcgagcaccatttctgcaagccgg
caattgaagcagtttattgaatcgctgcatgaagagaaagaagagtttcctcatttggca
ggctatgcggaaaaacttgctgcgcttccggaagtgcaacaggccattgaacgctgtatt
gatgatcatggtgaagtgatggatcatgcgagcgaacggttgcgttctatccgccagcag
cttcgaacaactgaggcgcgggtgcgcgaaaaattggagaatatcattcgttcgcagtcg
gcgcaaaaaatgttatctgatgcgattattacgattcgcaacgaccgctacgtcattcca
gtaaagcaggagtatcgcggtgtttacggcggcatcgtccatgatcaatcggcttcggga
gcaacattgtttattgaaccgcaagcagtggtagaattaaataaccagctccaagaagcg
cgtgtcaaagagaaacgagaaattgagcggattttaacggagttgacaagcattgtagcc
gaacacgcggaagcattgctcgaaaatgtcgacatattggcacagctcgattttattttc
gccaaagcaaaatatgccaataaattgaaagcgacaaagcctgtgatgaatgatcgcggc
tatatccggttattacaggcgcgccatccgctcattgaccaggacgttgttgttccgaat
gacattgagcttggcaaagactatacaacgatcgttattaccggtccaaacaccggcggg
aaaacagtcacattaaaaacgatcggattattgacattgatggcgcaagcaggcttattt
attcctgcgctcgatggttctgaattagcagtattccgttccgtctatgcggatatcggg
gatgagcaatcgattgaacaaagtttaagcacattttcttctcatatggtcaatatcgtt
gatattttacgcaacgttgatcatgaaagtctcgttttattcgatgaattaggtgcggga
accgatccgcaagaaggcgcggcgttggcgatcgccattttagatgaagtgcacgggcgc
ggagcacgtacggtggcgaccacccattatccggagttaaaagcatacggatacaatcgt
gacggcgtgatcaatgcaagtgtcgaatttgacaccgaaacgcttcgtccgacgtataag
ttattgattggcatcccagggcgaagcaatgcctttgaaatatcgaagcggcttggactc
gatgagcgcattatcgaacgggcaaaatcgcatattagcgcagaaagcaacaaagtggaa
aatatgatcgcttcgctagaacaaagcaagaagcgggcggaagaggaagagaaaaaagca
aaagaagcgcgcatggaagcggaaaaactccgcagcgattgggagcaaaaatgggaagaa
cttcatgaaaaacgcgatgaaataatagaagaagcgaaacggaaagcagccgacatcgtc
cgcgcttcccagcaagaggccgagcgaattattcgcgaacttcgccgaatgcaaaaagaa
aaacaagcggaaattaaagagcatgaactgattgaggcgaaaaaacgcctagaagaagcg
attccaacattagagaagaagaaaaaagaaagaaaaaaacagacgcagcacgcctttcag
cctggcgatgaagtaaaagtgacaagtttaaatcaaaaaggatatcttgtggaaaaggtt
tctgatgatgagtggcaagtacagctcggcattttaaagatgaaaatcaacgaacgggat
ttagaatatatcggcagtgcgccgaaaacggagacaaaaccgctcgctaccgtaaaagga
aaagactatcatgtcggattggagcttgacttgcgcggggaacggtacgaagatgcgata
gtccgtttagaaaaatatattgatgatgcgcttttagcgggatatcctcgcgtttcgatc
attcacggaaaagggacaggagcgcttcgcaaaggggtgcaagaatttttgaaaaagcat
cgctctgtgaaaaacttccattttggtgaagcaaatgaaggaggaacaggggtaacgatt
gtcgaactgaaatga
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