Parageobacillus toebii NBRC 107807: DER53_01205
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Entry
DER53_01205 CDS
T06505
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb03030
DNA replication
ptb03410
Base excision repair
ptb03420
Nucleotide excision repair
ptb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DER53_01205 (polA)
03410 Base excision repair
DER53_01205 (polA)
03420 Nucleotide excision repair
DER53_01205 (polA)
03440 Homologous recombination
DER53_01205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptb03032
]
DER53_01205 (polA)
03400 DNA repair and recombination proteins [BR:
ptb03400
]
DER53_01205 (polA)
Enzymes [BR:
ptb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DER53_01205 (polA)
DNA replication proteins [BR:
ptb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DER53_01205 (polA)
DNA repair and recombination proteins [BR:
ptb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DER53_01205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DER53_01205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Enkurin
Motif
Other DBs
NCBI-ProteinID:
QIQ31661
LinkDB
All DBs
Position
complement(235128..237764)
Genome browser
AA seq
878 aa
AA seq
DB search
MKKKLVLIDGNSIAYRAFFALPLLHNDKGIHTNAVYGFTMMLMKILEEEKPTHMLVAFDA
GKTTFRHKTFEEYKGGRQQTPPELSEQFPLLRELLDAYRIRFYELENYEADDIIGTLCTK
AEKEGFEVKVISGDRDLTQLATDYVTVDITKKGITDVESYTPETVQEKYGLTPEQIIDLK
GLMGDKSDNIPGVPGIGEKTALKLLKEFGTIENLLDSIEQVSGNKLKENLAKYRDLALMS
KQLATILRDAPVDLSLDDIEYNGYDVDKVIALFKELGFNSLLEKMAAPQGEEEAGVALSD
IDYTIVDEVTESILSDKAALVVEVLESNYHKAPILGFAISNEHGNFFIRTDTALSSSLFT
TWLEDESKKKSVFDGKRAIVSLKWQGIQLRGIQFDLLIASYLLNPSQSTEDVASIAKTKQ
YIDVQSDEAVYGKGAKQKIPDEPVLAEHLVRKAAAIRALEQDFICDLQENEQYSLFTDLE
LPLSSILAEMEFTGVKIDVKRLKEMGEELTEQLKEIEQEIYELAGQEFNINSPKQLGVIL
FEKLQLPVLKKTKTGYSTSAEVLEKLAPQHEIVEKILHYRQLGKLQSTYIEGLLKVVHHD
TNKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSEPDWVIFSADYSQIE
LRVLAHIANDENLIDAFRHDLDIHTKTAMDIFHVNEDEVTPNMRRQAKAVNFGIVYGISD
YGLSQNLNITRKEASEFIKRYFEIFPGVKQYMKDIVQEAKQKGYVTTLLHRRRYLPDITS
RNFNLRSFAERTAMNTPIQGSAADIIKKAMIDLSNRLKKENMKARMLLQVHDELILEAPK
EEVERLQQIVPEVMENAVQLRVPLKVDYHFGPTWYDAK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaagaaactcgtactcattgatggaaatagcattgcgtaccgcgctttttttgcg
ctgccgcttttacataacgataaagggattcatacgaatgcggtgtatggatttacgatg
atgttaatgaaaatcttagaagaagaaaagccgacacatatgctcgttgcctttgatgcg
ggaaaaacgacatttcgccacaagacgtttgaagaatataaaggaggacggcagcaaacg
cctccggaattatccgaacagtttccactattacgggagctgcttgatgcgtaccgaatt
cgtttctatgagttggaaaattatgaagcggacgatattattggtacgttatgcacaaaa
gcggaaaaggaaggatttgaagtaaaagttatttccggagaccgcgatttaacacagctt
gcgactgattatgtaacggtagatattacaaaaaaaggtatcaccgatgtggaatcctat
actccagaaacagtgcaagagaaatacggattaacaccggagcaaattattgatttaaaa
ggattgatgggagataaatcggacaatattccaggggtgccgggaatcggcgaaaaaacg
gcattaaagctgttaaaagagtttggcacgattgaaaacctgctagattccatcgagcaa
gtaagcggaaataaattgaaagagaatttggcaaaatatcgtgaccttgctcttatgagc
aaacagctggcaaccattttacgcgatgctccagtcgatctttcgttagatgatatagaa
tataacggatatgatgttgataaagtgattgctctatttaaagaacttggttttaactcg
cttcttgaaaaaatggcggccccgcaaggcgaagaagaggcgggggttgcgctatcggac
atcgattatacgatcgtcgatgaggtaacggaatccattttgtccgataaggcggccctc
gttgtcgaagtgttggaatcaaactatcataaggcgccgattttgggctttgcgatctcc
aatgagcatggaaacttctttattcgtacagataccgcgttgtcgtcttctttatttaca
acatggctggaagatgaatcaaagaaaaaaagcgtttttgatggcaagcgggcaatcgtt
tctttaaaatggcaaggaatacagttgcgcggtattcaatttgatttattaatcgcttcg
tatttgttaaatccatcccaatctacagaagatgtcgcttctattgcaaaaacgaagcaa
tatatcgacgttcagtccgatgaagcagtatatggaaaaggcgcgaaacaaaaaattccg
gatgagccagttttagcggaacatctcgtgcgtaaagcagcggcgatacgcgcattagag
caagattttatttgcgatttacaggaaaatgagcaatattctttattcactgatttggaa
ttgcccctatcttccattcttgcggagatggagtttaccggtgtgaaaattgatgtcaag
cggttaaaagagatgggcgaagaattgacggaacagctaaaagaaatagaacaagaaatt
tacgaattagctggtcaagagttcaacatcaattcaccaaaacagttaggtgtcattttg
tttgaaaagctgcaactgcctgtattgaaaaaaacgaaaacaggctattccacatcggcg
gaagtgctcgaaaaacttgcgccacaacatgaaattgtcgagaaaattttgcattaccgc
caattaggaaaactgcaatcaacgtatatcgaagggttattaaaagtggtgcatcatgac
acgaacaaagttcatacgatttttaaccaagcgctcacccagacaggacggttgagctct
acggaaccaaatttgcaaaacatcccgattcgtttagaagaagggcgaaaaatccgacaa
gcgttcgttccatcagaaccggattgggtgattttttccgcggattattcgcaaattgaa
ttgcgtgtgcttgcccatattgcaaatgatgaaaatttaattgatgcgtttcgtcacgat
ttagatattcatacgaaaacagcaatggatatttttcatgtgaacgaagatgaagtgacg
ccaaacatgcgccggcaagcgaaagcggtaaactttggcattgtttacggcatcagcgac
tatgggctgtcgcaaaacttaaatattactaggaaggaagcaagtgaatttattaaacga
tattttgagatttttccaggggtaaagcaatatatgaaagatatcgtccaagaggcaaaa
caaaaaggttatgttactacgcttttgcatcgtcgccgctatttgccggacattacaagc
cgaaacttcaacttgcgcagctttgcggaacgaacagcgatgaatacaccgattcaaggg
agcgctgccgatattattaaaaaagcgatgatcgatttatcgaatcggttgaaaaaagaa
aacatgaaagcacgaatgttgctgcaggtgcatgacgaactcattttggaagcgcctaaa
gaagaagtagaacgattgcaacaaattgttccggaagtaatggaaaatgcggtgcaatta
cgggtaccgcttaaagtggattatcattttggaccaacatggtatgacgcaaagtaa
DBGET
integrated database retrieval system
