Parageobacillus toebii NBRC 107807: DER53_01595
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Entry
DER53_01595 CDS
T06505
Symbol
pepV
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00300
Lysine biosynthesis
ptb01100
Metabolic pathways
ptb01120
Microbial metabolism in diverse environments
ptb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DER53_01595 (pepV)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptb01002
]
DER53_01595 (pepV)
Enzymes [BR:
ptb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DER53_01595 (pepV)
Peptidases and inhibitors [BR:
ptb01002
]
Metallo peptidases
Family M20
DER53_01595 (pepV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DUF5715
Motif
Other DBs
NCBI-ProteinID:
QIQ31728
LinkDB
All DBs
Position
complement(319142..320554)
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AA seq
470 aa
AA seq
DB search
MNIDWMEEVLKRKEALIQDTQALLRIPSVLDEENATEEAPLGQGVYEALQFLLQRGQEEG
FAVKNVDGLAGHLEIGQGEELIGVLCHVDVVPPGDGWSSDPFAAEIRDGKLYARGAIDDK
GPTMAAFYAMKIVKELGLPLQKRVRMIVGTDEESKWRCVEHYFKHEEMPTMGFAPDADFP
IIYAEKGIVDMDLRKPSIGTQEESEIQLQSFQAGRRYNMVPDFAKAVLLVRADRQQEIEQ
QYRQFLHETSMNGNAVVEGNTVTLQLEGISAHAMEPENGKNAGLWLAKWLSDVALDTQAQ
SFIRFVTDYFFADSRGKALGIAYNDEITGDLTVNVGILSYDAQAGGKLGINIRYPVTNDI
EQTKQKLQNIAAQHGFALEHFSDSKPHYVDPNHVLIKTLQRVYEEQTGERASLLSIGGGT
YARSLKAGVAFGPLFPGRPDVAHQKDEYIMIDDLLKATAIYAQAIYELAK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgattggatggaagaggtattgaagcgaaaagaggcgcttattcaagatacg
caggcgctattgcgcattccgagcgttctcgatgaagagaatgcaacagaagaagccccg
cttggacaaggagtatacgaggcgttgcagtttttattgcagaggggccaagaagaaggg
tttgcggtaaaaaacgtcgatggcctcgcgggacatcttgaaatcggacaaggagaggaa
ctcatcggcgtattatgccatgtggatgttgtaccaccgggagatggctggtcaagcgac
ccgtttgctgcagaaatccgtgatgggaaattatatgctcgcggcgcgattgacgataaa
ggaccgacaatggctgcattttatgctatgaaaattgtgaaagaactcgggttgccattg
caaaaacgagtgcgtatgattgttggaacagatgaagaaagcaagtggcgttgtgtcgaa
cattattttaagcatgaggaaatgccgacaatgggatttgctccggatgcggattttccg
attatttacgcggaaaaaggaattgtcgatatggatttgcgcaagccatcaataggaaca
caggaagaaagtgaaattcagctgcagtcgttccaggcaggacgacgttataatatggtt
cctgactttgctaaagcggtattgctcgttcgtgcagaccggcaacaagaaatcgaacag
cagtatcgccagtttcttcatgaaacgagcatgaatggaaatgctgttgtggaaggcaat
accgttactcttcaattagaaggaatttccgctcatgcgatggaaccagaaaacgggaaa
aatgcaggtttatggctggcgaagtggctatcagatgttgcgttggatacgcaggcgcaa
tcgtttatccgttttgtgacggactatttctttgccgattctcgtggaaaagcgttaggc
attgcttacaacgatgagattaccggcgatttaacagtcaatgttggaatattatcatat
gatgcgcaagctggaggaaagcttggcattaacatacgctatccggtcaccaatgatata
gaacaaacgaagcaaaaactacagaacatcgcagcgcagcatggttttgcgttggaacat
tttagcgattcaaaaccgcactatgttgatccaaatcatgtacttataaagacgcttcaa
cgcgtatacgaagaacaaacaggagaacgcgcttccttgctttccatcggcggcggtaca
tatgcccgttcgctgaaagcgggagtagcgtttggaccgctgtttccgggacggccggat
gtggcgcatcaaaaggatgaatatatcatgatcgatgatttattgaaagcaacggcgatt
tacgctcaggcaatttatgaattagcaaaatga
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