Parageobacillus toebii NBRC 107807: DER53_01605
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Entry
DER53_01605 CDS
T06505
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptb03009
]
DER53_01605
Enzymes [BR:
ptb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DER53_01605
Ribosome biogenesis [BR:
ptb03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DER53_01605
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NA-iREase3
Motif
Other DBs
NCBI-ProteinID:
QIQ31730
LinkDB
All DBs
Position
complement(321221..321943)
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AA seq
240 aa
AA seq
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MGLRIDKMLANMGYGTRKEVKKLLKSGVVKIDGVVVKDPKTQVNPTEQVVTVRGKEVEYK
EFIYLMMNKPPGVVSATEDVVEETVVDLLEEEDRVFSPFPVGRLDKDTEGLLLLTNDGQL
AHQLLSPKKHVPKTYFAVIEGEVTEEDVAAFRHGVVLDDGYETKPAELVVLKSGLRSDVE
VTITEGKFHQVKRMFRAIGKRVIYLKRIQMGPLVLDPSLDLGEYRELTDEEVEMLKQFRP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttgggattgcgtattgataaaatgctcgccaacatggggtacgggacaagaaaagaagta
aaaaaattgctgaaatcaggagtcgtcaaaattgacggggttgtggtcaaagatccgaaa
acacaagtcaacccgacggagcaggtcgtgacagtgcggggaaaagaagtggagtataaa
gaatttatttatttaatgatgaacaaaccgccgggagtcgtttcggcgacggaagatgtg
gtggaagaaacggttgttgacctgctagaagaggaagatcgcgtgttttcgccattccca
gttgggcgtctggataaagatacagaggggcttttattgttgacgaatgatgggcaatta
gctcatcagctgctttccccgaaaaagcatgtgccgaaaacgtattttgccgttattgag
ggggaagtgacagaggaagatgtggcggcattccgccacggggtggtgttggatgatggt
tatgaaacaaagccagcggaactggtggttttaaaatcgggacttcgttcggatgtggag
gtaacgatcacagaaggaaagtttcaccaagtgaagcgaatgttccgggcgataggtaaa
cgggtcatttacttaaaacggattcaaatggggcctcttgtgcttgatccgtcgctagat
cttggtgaatatcgagaattgacggatgaggaagtggagatgttaaaacaatttcgccca
tga
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