Parageobacillus toebii NBRC 107807: DER53_02220
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Entry
DER53_02220 CDS
T06505
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00300
Lysine biosynthesis
ptb00470
D-Amino acid metabolism
ptb01100
Metabolic pathways
ptb01110
Biosynthesis of secondary metabolites
ptb01120
Microbial metabolism in diverse environments
ptb01230
Biosynthesis of amino acids
Module
ptb_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
ptb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DER53_02220
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DER53_02220
Enzymes [BR:
ptb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DER53_02220
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
PrpF
Motif
Other DBs
NCBI-ProteinID:
QIQ31825
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All DBs
Position
complement(421474..422328)
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AA seq
284 aa
AA seq
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MNKFSFTKMHGLGNSYIYVNMFEETIPESLLSSLAVKVSNVNTGIGADGMILICPSEVAP
VKMRIFNSDGSEGKNCGNGLRCVAKYAYEHGMVKDRSFFIETLSGLVKAEVTVENGAVTN
VTIDMGKPRLKRSEIPMIGLDAERVVAEPFEVDGKQYEITAVSMGNPHVIFYVDDITTAP
VTTLGPIVEKDERFPEGVNVEFVEVVNDHELHFRVWERGSGVTQACGTGACAAVVASVLN
GKTARNKETVVHLAGGDLIITWTDEGNVRMTGPAETICTGVYYY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattttcgtttacaaaaatgcatgggctcggcaatagttatatatatgtaaat
atgtttgaagaaacaattccagaatcattattatcgtccttagcggtgaaagtatccaac
gtaaataccggaatcggagcggatggcatgattctcatttgcccgtcagaagtagctccg
gtaaaaatgcggatttttaatagcgacggttctgaagggaaaaattgcggcaatggcttg
cgttgtgtcgcaaaatatgcatatgagcatggaatggtaaaagaccgatccttttttatt
gaaacattgtccggactcgtgaaggcagaggttaccgtagaaaatggagccgttacaaac
gttaccattgatatgggaaagccgcgtttaaagcggagcgagatcccgatgattggtctg
gatgcggaacgagtcgttgcagaaccgtttgaagtcgatggaaaacagtatgaaattaca
gccgtttcgatgggaaaccctcatgtcattttttacgtggatgatatcacaacagcgccg
gtaacgacacttggtccgattgtggaaaaggacgagcggtttcctgaaggggtaaatgtc
gaattcgtcgaggtggtaaacgaccatgaactccattttcgcgtatgggagcgcggctct
ggagtgacgcaagcttgcggtacaggggcgtgtgcagctgttgttgcttccgtattaaat
ggaaaaacagcgcgaaataaagaaacggtcgtccatttggcaggcggggatttaatcatt
acatggacagatgagggaaatgtgcggatgacaggaccggcggaaacgatttgtacaggt
gtgtattactattaa
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