Parageobacillus toebii NBRC 107807: DER53_04080
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Entry
DER53_04080 CDS
T06505
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00260
Glycine, serine and threonine metabolism
ptb00460
Cyanoamino acid metabolism
ptb00630
Glyoxylate and dicarboxylate metabolism
ptb00670
One carbon pool by folate
ptb00680
Methane metabolism
ptb01100
Metabolic pathways
ptb01110
Biosynthesis of secondary metabolites
ptb01120
Microbial metabolism in diverse environments
ptb01200
Carbon metabolism
ptb01230
Biosynthesis of amino acids
ptb01240
Biosynthesis of cofactors
ptb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DER53_04080
09102 Energy metabolism
00680 Methane metabolism
DER53_04080
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DER53_04080
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DER53_04080
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DER53_04080
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DER53_04080
Enzymes [BR:
ptb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DER53_04080
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
SelA
mCpol
FAST_1
Motif
Other DBs
NCBI-ProteinID:
QIQ32140
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All DBs
Position
complement(788895..790130)
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AA seq
411 aa
AA seq
DB search
MNYLPQQDPQVFEAIQNELKRQQSKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRY
YGGCEYVDVVEDLARERAKKLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHG
GHLTHGSPVNFSGIQYNFVEYGVDPETHVIDYDDVLEKARIHKPKLIVAGASAYPRVIDF
KRFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGGMILCKE
EFAKQIDKAIFPGIQGGPLMHVIAAKAVALGEALQDSFKTYAQNIINNAKRLAEALKKEG
FTLVSGGTDNHLLLIDLRSLGLTGKVAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGT
AAVTTRGFGLEEMDEIASIISLTLKNHEDEAKLEEARKRVAALTEKFPLYR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaactacttgccacaacaagatccgcaagtatttgaagcgattcaaaatgagttgaaa
cggcagcaatcaaaaattgaattaatcgcgtcagaaaattttgtcagccgcgctgttatg
gaagcgcaaggatcggtattaacgaataaatatgccgaaggatatccgggccgccgctat
tatggtggctgcgaatatgtcgatgtcgtcgaggatctcgcgcgcgaacgggcgaaaaaa
ttgtttggcgcggaacatgccaacgtacagccgcattctggcgcacaagcgaacatggcg
gtatattttactgttttggaacatggcgatacggtgcttgggatgaatttgtcgcacggc
ggtcatttaacgcatggcagcccagtcaactttagcggcattcaatataactttgtcgaa
tatggtgtcgatccagaaacacatgtcattgattatgatgatgtgcttgaaaaagcgcgc
atacataagccgaaactgattgtagcaggggcaagcgcttatccgcgcgtcatcgatttt
aaacgtttccgtgaaatcgctgatgaagtaggggcgtacttgatggtagacatggcgcac
attgcaggtcttgttgcggcaggtcttcatccaaatccggtgccatatgcgcattttgtg
accacaacgacgcataagacgctccgcgggccgcgcggcggcatgatcctttgcaaagaa
gagtttgcaaaacaaattgacaaagcgatcttcccaggcattcaaggcggaccgctcatg
cacgtcatcgcggcgaaagcagtcgcgctcggtgaagcactgcaagacagctttaaaaca
tatgcgcaaaatatcatcaacaacgcaaaacgcctcgcggaagcattgaaaaaagaaggc
tttacactcgtttccggcggaacagacaaccacttgttgttaattgatttacgttccctt
ggcctcactggaaaagtggcggaaaaagtgttggacgaagtcggtatcaccgtcaacaaa
aatacgattccgtacgatccggaaagcccatttgtgacaagcggcatccgtatcggcacc
gccgcggtaacgacgcgcggattcggtttggaagaaatggatgaaatcgcaagcattatt
agtcttacattaaaaaatcacgaagacgaagcaaaattggaagaagcgcgaaaacgcgta
gcggcattaacggaaaaattcccattatatcgttga
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