Parageobacillus toebii NBRC 107807: DER53_04275
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Entry
DER53_04275 CDS
T06505
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00550
Peptidoglycan biosynthesis
ptb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DER53_04275
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ptb01003
]
DER53_04275
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptb01011
]
DER53_04275
Enzymes [BR:
ptb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DER53_04275
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DER53_04275
Glycosyltransferases [BR:
ptb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DER53_04275
Peptidoglycan biosynthesis and degradation proteins [BR:
ptb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DER53_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
WRC
Motif
Other DBs
NCBI-ProteinID:
QIQ32176
LinkDB
All DBs
Position
831702..833753
Genome browser
AA seq
683 aa
AA seq
DB search
MEIIPSSRFRGTWKYIRAFVFISFILAILFVVTLAGLIAFAKLKGAPPLAVPQTTIFYAD
DGTKIGESDNGQTRYWVDLDDISPYIVQATVAVEDRKFYEHHGFDIKRIIGAIIADIKAM
AKVQGASTITQQYARNLFLNHEKTWTRKLQEALYTIRLEANYSKKQILEGYLNTIYYGHG
AYGIEAAAHHYFGKPAKQLTLSEAAMLAGIPKGPYYYSPLIDEKRAKARQKTVLLSMAET
GYISKKEAEQAYKEPLVYSPHHKIETKKIAPYFQDVVKYVLRNQLGLDERTIEMGGLRVY
TSLNTKMQEIAEQNIHDIIDPHSNIQAALVAMDPRTGEVKALVGGRDYNKSPFNRAVQAE
RQPGSTFKPFLYYAAIQQGFTPSTQMRSELTTFAFDNGKATYTPHNYNNYYANDSITLAQ
AIALSDNVFAVKTHLFIGEEKLVETAKKLGITSKLKAVPSLALGTSPVKVIDMVKAYSVF
ANNGKKVEPVFIKKVVNHHGETIYEYKPSSKQVLDPDAAYVTTQLMTGMFDPKLNDYTTV
TGQSIRKEITRPYAGKSGTTETDSWMIGFSPQLVAGVWTGYDRGETIDKIAEKQYAKQIW
VQFMEKSLQGKPKKKFKPTKGVVGVYVDPDNGKLATKSCPVKRLTYYISGSEPNDYCTDH
LHQKKSKKKEKQKNWFEKLFPWF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttggaaatcattccaagcagccggtttcgcggaacatggaaatacattcgggcgttcgtt
tttattagttttatcctagcaatcttattcgtcgttacgcttgccggtttgatcgcgttt
gccaaattaaaaggagccccgcctttagcagtgccgcaaacgacgattttttatgcggat
gatggcacaaaaatcggcgagagcgataacgggcagacgcgttactgggtagaccttgat
gatatatccccctatattgtacaagcaacggttgctgtagaagatcggaaattttatgaa
catcacggctttgatataaagcgcattatcggggccattattgccgatataaaggcgatg
gcgaaagtgcaaggagcaagcaccatcacccagcaatatgcgcgaaatttatttttgaat
cacgagaaaacatggacgcggaaattgcaagaagcattatatacgattcgcctcgaagcg
aattacagcaaaaaacaaattttagaaggatacttaaacaccatttactacggccatggc
gcttacggaattgaagcggctgctcatcattattttggaaaaccggcaaaacagcttacc
ttaagcgaagcggcaatgttagccggaattccgaaaggtccatattactattcgccactt
attgatgagaagcgggcaaaagcgcggcaaaaaacggtgcttttgtcaatggcggaaact
ggatacatcagcaaaaaagaagcggaacaagcgtataaagaaccgcttgtttattctccc
catcacaaaatagaaacgaaaaagatcgccccttattttcaagatgtagtgaaatatgtg
ctgcgaaatcaattaggattggatgaacgcacgattgaaatgggcggattgcgcgtgtat
acatcgctgaatacgaaaatgcaggaaattgcggaacaaaacattcatgacatcattgac
cctcactcgaacattcaagcggcacttgtagcgatggatccgcgcacaggagaagtaaaa
gcgctcgtcggcggcagagattacaacaaaagccctttcaaccgcgccgtgcaagcggaa
cggcagccgggctctacgtttaaaccatttctatactacgcagccattcaacagggattt
acgccgtctacacaaatgcgaagcgagttgaccacctttgcctttgacaatggaaaagca
acgtatacaccacataactacaataactactatgcgaacgactcgattacgctcgctcaa
gccatcgcgctatcagacaacgtatttgctgtaaaaacgcatttgtttatcggtgaggaa
aaactggtagagacagcgaaaaaactaggcattacaagcaaattaaaagctgttccttca
ctcgcgctcggaacatcgccggtgaaagtgatcgatatggtgaaagcttacagcgtattt
gccaataacggcaaaaaagtcgagccagtttttattaaaaaagtcgtcaatcatcatgga
gaaacaatttacgaatacaaaccatcaagcaaacaagtgctagatccggacgccgcatat
gtaacgactcagctgatgacaggcatgtttgatccgaaattaaatgattatacaacagtc
accgggcaatcgattcgaaaggagatcacacgcccatacgcaggaaaatcgggaacaaca
gaaacagatagctggatgattggattttcgccacaactagttgcaggggtatggaccggt
tacgaccgcggggaaacgattgataaaattgcggagaaacaatatgcaaaacaaatttgg
gtgcaatttatggaaaaaagtttgcaaggaaaaccaaagaaaaagtttaaaccaaccaaa
ggggtcgttggggtctatgtcgatccggataacggcaaacttgcgacaaagtcatgtccg
gtaaagcgtcttacttattatatctctggctcagaaccgaacgactactgcaccgaccat
ttacatcaaaagaaatcaaagaaaaaagaaaagcagaaaaattggtttgaaaaactgttc
ccttggttctaa
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