Parageobacillus toebii NBRC 107807: DER53_04715
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Entry
DER53_04715 CDS
T06505
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00750
Vitamin B6 metabolism
ptb01100
Metabolic pathways
ptb01240
Biosynthesis of cofactors
Module
ptb_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
DER53_04715 (pdxS)
Enzymes [BR:
ptb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
DER53_04715 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
NMO
IGPS
IMPDH
NanE
TetR_C_27
FMN_dh
DUF188
Motif
Other DBs
NCBI-ProteinID:
QIQ32247
UniProt:
A0A6G9J207
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Position
926890..927774
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AA seq
294 aa
AA seq
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MAITGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVAR
MADPTVIEEVMKAVSIPVMAKARIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQ
FTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVSMSED
ELVTEAKNLGAPVEVLREIKRLGRLPVVNFAAGGIATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATAHYEDYELIAHLSKGLGSAMRGIDVASLLPEQRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggcaattacaggtacagatcgtgtaaaacgaggaatggcggaaatgcaaaaaggcggc
gtcatcatggacgtggtgaatgcggaacaggcgaaaatcgcagaggcagccggtgcagta
gcggtgatggcattggaacgcgtccctgctgatattcgtgccgctggcggtgtcgcgcgc
atggcagatccgacggtcattgaagaagtgatgaaggccgtatcgattcctgttatggcc
aaagcgcgtatcggtcattacgtcgaagcacgcgtccttgaggcgttaggtgttgattat
attgatgagagtgaagtattaacaccagctgatgaagaattccatattgataaaagacaa
tttaccgttccgtttgtttgcggttgtcgcgacttaggagaagcggcgcgccgcattgct
gaaggggcatcgatgcttcgcacaaaaggagaaccaggaacaggaaacattgtcgaggca
gtgcgtcatatgcgcaaagtaaatgcgcaaatacgcaaagttgtcagcatgagtgaagac
gagcttgtgacagaagcgaagaatttaggtgctccggtcgaagtattgcgcgaaattaag
cggttaggccgcctccctgtcgtcaactttgccgcaggcggtatcgcgaccccggctgac
gcggcattgatgatgcatttaggtgcagatggggtatttgtcggttcaggtatttttaaa
tcggaaaatccagaaaaatatgcgcgggcgatcgttgaagcaacggcacattatgaagat
tacgagctaatcgcccatttatccaaaggattaggtagcgcaatgcgcggcattgatgtc
gcatcattattgccagaacaacgtatgcaagagcgtggttggtaa
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