Parageobacillus toebii NBRC 107807: DER53_05860
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Entry
DER53_05860 CDS
T06505
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
ptb
Parageobacillus toebii NBRC 107807
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
DER53_05860
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
S1
HHH_9
HHH_7
YqgF
S1_RRP5
T2SSK
PG_binding_2
HHH_6
DUF1464
RuvC
CCDC122
Motif
Other DBs
NCBI-ProteinID:
QIQ32421
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Position
1128416..1130602
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AA seq
728 aa
AA seq
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MLNREALMDLIANELHLSTKQVSNVISLSEEGNTVPFIARYRKEMTGALDEVQIRDILEK
WNYLQNLEQRKEEVLRLIDEQGKLTDDLKNAIINATKLQQVEDLYRPYRQKRRTKATIAK
EKGLEPLAEWLWTCPMRPRPEEKAQEFIQPEKEVRTVEEALQGAKDIIAEKASDDAQFRQ
WIRQHTWKKGVIISTVKESENDEKKVYEMYYEYEEPVHRIVPHRVLALNRGEKEGVLRVS
IQAPVEDIMTYLQKHIITNPQSPAASLLSEAIEDGYKRLIEPSIERDIRNELTEKAEERA
IHIFAENLRKLLLQPPLKGKIVLGIDPAYRTGCKLAVVDETGKLLKIDVIYPHPPQQQIE
EAREKLIRIIEEYHVEMIAIGNGTASRETEQFVADTLKQVDKEIFYLIVNEAGASVYSAS
DLARQEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSVGVGQYQHDVSQKKLAQSLQFV
VETVVNQVGVNVNTASVSLLQYVSGLTKTVSENIVKRREEQGKFKNREELKSIPRLGAKT
YEQCIGFLRIIDGDEPLDRTPIHPERYEEVKRLLHQIGFTTEHIGSEELRQALQSLSIPD
TAAELGIGELTLQDIIDALIRPERDPRDELPKPLLRKDILKMEDLKRGMELEGTVRNVVD
FGAFVDIGVKQDGLVHISKLSKQYVRHPLDVVSVGDVVKVWVDNVDLDKGRISLSMIPPE
ESEKTLLS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatagagaagcgttgatggacctgatagcgaatgaattacatttgtccacaaag
caagttagcaatgtgatttctctttctgaggaaggaaatacggtgccgtttattgcccgc
tatcggaaagagatgacaggcgccttagatgaagtgcaaattcgtgatattttggagaaa
tggaattacctacaaaacttagaacagcggaaagaagaagtccttcgccttattgatgaa
caaggaaaactaacggatgatctaaaaaacgcgatcatcaatgctacgaaactgcagcaa
gtggaagatttgtatcgtccttatagacaaaaacgacgtacaaaagccaccattgccaag
gaaaaagggttagagcctcttgcggaatggttatggacgtgtccaatgaggccgcggccg
gaagaaaaagcgcaagagtttattcaaccagaaaaagaagtacgtaccgtcgaagaggcg
cttcaaggtgcgaaagacatcatcgctgaaaaggcatcggatgatgcacaatttcgccaa
tggattcgccagcacacatggaaaaaaggcgtgatcatatcgactgtcaaagagtcggaa
aatgatgagaaaaaagtatatgaaatgtattacgaatatgaagagccagtacataggatt
gttccgcatcgtgtattagcgctcaatcgcggcgaaaaagaaggagtgttgcgtgtttcc
attcaggcgccggtagaagatattatgacatacttacaaaagcacattattacaaatccg
caatctcccgccgcttccctcctttctgaagcgattgaggacggctacaaaaggcttatt
gaaccgtcaatcgagcgggatattcgcaatgaattaaccgaaaaagcggaagagcgggcg
attcatatttttgcggagaacttacgcaagctattgcttcagccgccgttaaaagggaag
attgttcttggtatagaccctgcctatcgaacgggatgcaagctggcggtggtcgacgaa
acaggcaaattgctgaaaatcgatgtcatttaccctcatcccccgcagcaacagatagaa
gaagcgagagaaaagttaatccgcattatcgaagaatatcatgtcgaaatgattgccatt
gggaacggaactgcatcaagggaaacggagcaatttgtggcggacaccttaaaacaagta
gataaagaaattttttaccttattgtcaatgaagcgggagcgagcgtctattccgcctct
gaccttgcccgtcaagagtttccagatttacaggtagaagaacggagcgcagtttcgatc
gcaaggcgtgtacaagatccgcttgccgaactggtgaaaattgatccaaaatcagtagga
gttggccaatatcagcatgacgtttcacaaaaaaaattagcgcaatcattgcagtttgtc
gtggaaaccgttgttaaccaagttggcgtcaacgtcaacactgcctccgtctctttattg
caatacgtatcagggcttacgaaaacagtatcggaaaatatcgtaaaacgccgtgaggaa
caaggaaaatttaaaaaccgcgaggaattaaaatcgataccgcggcttggtgctaaaaca
tatgaacagtgtatcggatttttacgcattattgatggagacgaaccgctcgaccgtacg
ccgattcatcctgagcggtatgaagaagtgaaaaggctgttgcaccaaattggttttaca
actgaacatatcggaagtgaagagcttcgtcaggcattgcaatctctttccattcctgac
acggctgctgaacttggcatcggagaattgacattacaagacattatcgacgctttaatt
cgtccagaacgtgatcctcgcgatgagctgccaaagccgttattacgaaaagacatttta
aaaatggaagatttaaaaaggggaatggagttagaagggacggtgcggaacgtcgtcgat
ttcggagcgtttgtggatattggggttaagcaggatgggcttgttcacatttcaaaatta
agcaagcaatatgtacgtcatccgcttgacgttgtatcagtaggcgatgtggtaaaagtt
tgggttgacaatgtagatctcgataaaggaagaatttctttatctatgattccaccggaa
gaatcagaaaaaacactgctttcatga
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