Parageobacillus toebii NBRC 107807: DER53_09355
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Entry
DER53_09355 CDS
T06505
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ptb
Parageobacillus toebii NBRC 107807
Pathway
ptb00010
Glycolysis / Gluconeogenesis
ptb00020
Citrate cycle (TCA cycle)
ptb00260
Glycine, serine and threonine metabolism
ptb00280
Valine, leucine and isoleucine degradation
ptb00310
Lysine degradation
ptb00380
Tryptophan metabolism
ptb00620
Pyruvate metabolism
ptb00630
Glyoxylate and dicarboxylate metabolism
ptb00640
Propanoate metabolism
ptb00670
One carbon pool by folate
ptb00785
Lipoic acid metabolism
ptb01100
Metabolic pathways
ptb01110
Biosynthesis of secondary metabolites
ptb01120
Microbial metabolism in diverse environments
ptb01200
Carbon metabolism
ptb01210
2-Oxocarboxylic acid metabolism
ptb01240
Biosynthesis of cofactors
Module
ptb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ptb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ptb_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ptb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ptb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
DER53_09355 (lpdA)
00020 Citrate cycle (TCA cycle)
DER53_09355 (lpdA)
00620 Pyruvate metabolism
DER53_09355 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
DER53_09355 (lpdA)
00640 Propanoate metabolism
DER53_09355 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DER53_09355 (lpdA)
00280 Valine, leucine and isoleucine degradation
DER53_09355 (lpdA)
00310 Lysine degradation
DER53_09355 (lpdA)
00380 Tryptophan metabolism
DER53_09355 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DER53_09355 (lpdA)
00670 One carbon pool by folate
DER53_09355 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptb04147
]
DER53_09355 (lpdA)
Enzymes [BR:
ptb01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
DER53_09355 (lpdA)
Exosome [BR:
ptb04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
DER53_09355 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
HI0933_like
FAD_oxidored
FAD_binding_2
DAO
FAD_binding_3
NAD_binding_8
UDPG_MGDP_dh_N
3HCDH_N
AlaDh_PNT_C
Amino_oxidase
Thi4
fvmX5
Motif
Other DBs
NCBI-ProteinID:
QIQ32975
LinkDB
All DBs
Position
1807975..1809387
Genome browser
AA seq
470 aa
AA seq
DB search
MVVGDFAIETDTLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALIS
ASHRYVEAKHSEDIGIKAENVTVDFSKVQQWKASVVKKLTSGVEGLLKGNKVEIVRGEAY
FVDANTVRVINGDSAQTYTFKNAIIATGSRPIELPGFKFSNRVLDSTGALSLQEVPKSLV
VIGGGYIGTELGTAYANFGTKVTIIEGADEILSGFEKQMTAIVKRRLKKKGVEIFTNALA
KGVEEREDGVTVTFEVKGETKTIDADYVLVTVGRRPNTDELGLEQIGIKLTDRGLIEIDK
QCRTSVPNIYAIGDIVQGPPLAHKASYEGKIAAEAIAGKPSEIDYLAIPAVVFSEPECAS
VGYFEQQAKDEGIDVVTAKFPFAANGRALSLNDTDGFMKLVVRKEDGVVIGAQIVGPNAS
DMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVALGTPIHIISK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtagttggcgattttgcaattgaaacggatacgcttgtcgttggagcgggtcctggt
ggttatgtagcagctattcgcgctgcacagttagggcaaaaagtaacgattgttgaaaaa
ggaaatcttggcggagtatgcttaaatgtcggatgtattccatctaaagcgctcatctcc
gcaagccatcgctatgttgaagcgaaacattcagaagacatcggaattaaagcagaaaac
gtaaccgttgatttttctaaagtgcaacaatggaaagcaagcgtcgtgaaaaaattaacg
agcggcgtggaaggattgctaaaaggaaacaaagtcgaaatcgtacgcggagaagcgtat
tttgttgatgcgaatacggtgcgtgttatcaatggtgatagcgcgcaaacatatacgttt
aaaaacgcaattattgcaacaggctctcgtccgatcgaacttcctggctttaaattttcc
aatcgcgtgcttgattccacaggcgcgctcagtctgcaggaagttccaaaatcgcttgtc
gtaatcggcggcggttatatcggaacagaattaggaacagcgtatgctaactttggaaca
aaagtaaccatcattgaaggagcagatgaaattttatctggttttgaaaaacaaatgacg
gcaattgttaaacgccgcttaaagaaaaaaggtgtagaaatctttactaacgctcttgct
aagggagtcgaagagcgcgaagacggtgtgacagtaacctttgaagtaaaaggcgaaacg
aaaacaattgatgcagactatgtgcttgtgacggtcggacgtcgtccgaacacggatgag
cttggcttagaacaaatcggcattaaattgacagaccgcggcttaattgaaattgacaaa
caatgccggacaagcgttccaaacatttatgccatcggtgatatcgtccaaggtccaccg
cttgcccataaagcatcatatgaaggaaaaatcgccgccgaagcgattgccggaaaaccg
tctgaaatcgattatttagctattccggcagtggtcttctccgagcctgaatgcgcatct
gtcggttattttgagcaacaggcgaaagatgaaggcatcgatgtagtaacggcgaaattc
ccatttgcggctaacggccgtgccctttcgttgaatgacacagacggctttatgaaactt
gtcgtccgcaaagaagatggcgttgtgatcggagcgcaaatcgttggtccaaacgcttct
gacatgattgcagagcttggtcttgcgattgaagcaggaatgactgcggaagatatcgct
ttgacgattcatgctcacccaacattgggtgaaatagcgatggaagctgcggaagttgcc
ctcggcactccaatccatattattagtaaataa
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